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2013

The conformational landscape of an intrinsically disordered DNA-binding domain of a transcription regulator.

The journal of physical chemistry. B

A. N. Naganathan, and M. Orozco
BioSuper: a web tool for the superimposition of biomolecules and assemblies with rotational symmetry.

BMC structural biology

M. Rueda, M. Orozco, M. Totrov, and R. Abagyan
Understanding the connection between epigenetic DNA methylation and nucleosome positioning from computer simulations.

PLoS computational biology

G. Portella, F. Battistini, and M. Orozco
Exploring early stages of the chemical unfolding of proteins at the proteome scale.

PLoS computational biology

M. Candotti, A. Pérez, C. Ferrer-Costa, M. Rueda, T. Meyer, J L. Gelpí, and M. Orozco
On the nature of DNA hyperchromic effect.

The journal of physical chemistry. B

M. D'Abramo, C L. Castellazzi, M. Orozco, and A. Amadei
Backbone FCH⋅⋅⋅O Hydrogen Bonds in 2'F-Substituted Nucleic Acids.

Angewandte Chemie (International ed. in English)

N. Martin-Pintado, G. F. Deleavey, G. Portella, R. Campos-Olivas, M. Orozco, M. J. Damha, and C. González
Unravelling the hidden DNA structural/physical code provides novel insights on promoter location.

Nucleic acids research

E. Durán, S. Djebali, S. González, O. Flores, J M. Mercader, R. Guigó, D. Torrents, M. Soler-López, and M. Orozco
Exploration of conformational transition pathways from coarse-grained simulations.

Bioinformatics (Oxford, England)

P. Sfriso, A. Hospital, A. Emperador, and M. Orozco
NAFlex: a web server for the study of nucleic acid flexibility.

Nucleic acids research

A. Hospital, I. Faustino, R. Collepardo-Guevara, C. González, J L. Gelpí, and M. Orozco
Toward an atomistic description of the urea-denatured state of proteins.

Proceedings of the National Academy of Sciences of the United States of America

M. Candotti, S. Esteban-Martín, X. Salvatella, and M. Orozco

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