Publications

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2011

HPC approaches to bioinformatics

The 10th Annual Meeting on High Performance Computing and Infrastructure in Norway

J L. Gelpí
Data Management in Massive Genomic Projects

IV International Symposium on BIOMEDICAL INFORMATICS IN EUROPE

J L. Gelpí
Effects of local electric fields on the redox free energy of single stranded DNA.

Chemical communications (Cambridge, England)

M. D'Abramo, M. Orozco, and A. Amadei
Scoring by intermolecular pairwise propensities of exposed residues (SIPPER): a new efficient potential for protein-protein docking.

Journal of chemical information and modeling

C. Pons, D. Talavera, X. de la Cruz, M. Orozco, and J. Fernández-Recio
Structural analysis of an equilibrium folding intermediate in the apoflavodoxin native ensemble by small-angle X-ray scattering.

Journal of molecular biology

S. Ayuso-Tejedor, R. García-Fandiño, M. Orozco, J. Sancho, and P. Bernadó
Nucleotide binding switches the information flow in ras GTPases.

PLoS computational biology

F. Raimondi, G. Portella, M. Orozco, and F. Fanelli
Molecular basis of substrate-induced permeation by an amino acid antiporter.

Proceedings of the National Academy of Sciences of the United States of America

L. Kowalczyk, M. Ratera, A. Paladino, P. Bartoccioni, E. Errasti-Murugarren, E. Valencia, G. Portella, S. Bial, A. Zorzano, I. Fita, M. Orozco, X. Carpena, J L. Vázquez-Ibar, and M. Palacín
Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia.

Nature

X. S. Puente, M. Pinyol, V. Quesada, L. Conde, G. R. Ordóñez, N. Villamor, G. Escaramis, P. Jares, S. Beà, M. González-Díaz, L. Bassaganyas, T. Baumann, M. Juan, M. López-Guerra, D. Colomer, J. M. C. Tubío, C. López, A. Navarro, C. Tornador, M. Aymerich, M. Rozman, J. M. Hernández, D. A. Puente, J. M. P. Freije, G. Velasco, A. Gutiérrez-Fernández, D. Costa, A. Carrió, S. Guijarro, A. Enjuanes, L. Hernández, J. Yagüe, P. Nicolás, C. M. Romeo-Casabona, H. Himmelbauer, E. Castillo, J. C. Dohm, S. de Sanjosé, M. A. Piris, E. de Alava, J. San Miguel, R. Royo, J L. Gelpí, D. Torrents, M. Orozco, D. G. Pisano, A. Valencia, R. Guigó, M. Bayés, S. Heath, M. Gut, P. Klatt, J. Marshall, K. Raine, L. A. Stebbings, A. P. Futreal, M. R. Stratton, P. J. Campbell, I. Gut, A. López-Guillermo, X. Estivill, E. Montserrat, C. López-Otín, and E. Campo
A systematic study of the energetics involved in structural changes upon association and connectivity in protein interaction networks.

Structure (London, England : 1993)

A. Stein, M. Rueda, A. Panjkovich, M. Orozco, and P. Aloy
nucleR: a package for non-parametric nucleosome positioning.

Bioinformatics (Oxford, England)

O. Flores, and M. Orozco

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