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2021

Simulating SARS-CoV-2 epidemics by region-specific variables and modeling contact tracing app containment

Nature Digital Medicine

A. Ferrari, E. Santus, D. Cirillo, M. Ponce De Leon, N. Marino, M. Teresa Ferretti, A. Santuccion Chadha, N. Mavridis, and A. Valencia

2020

RICH: Implementing Reductions in the Cache Hierarchy

Proceedings of the 34th ACM International Conference on Supercomputing (ICS'20)

V. Dimić, M. Moreto, M. Casas, J. Ciesko, and M. Valero
The GTEx Consortium atlas of genetic regulatory effects across human tissues

Science

M). The G. T. Ex C. Melé
Cis and trans effects differentially contribute to the evolution of promoters and enhancers

Genome Biology

K. Mattioli, W. Oliveros, C. Gerhanrdinger, A. D, M. PG, J. L. Rinn, and M. Melé
Towards Data-Flow Parallelization for Adaptive Mesh Refinement Applications

2020 IEEE International Conference on Cluster Computing (CLUSTER)

K. Sala, A. Rico, and V. Beltran
Fast gap-affine pairwise alignment using the wavefront algorithmAbstractMotivationResultsAvailability

Bioinformatics

S. Marco-Sola, J. Carlos Moure, M. Moretó, and A. Espinosa
Ad Hoc File Systems for High-Performance Computing

Journal of Computer Science and Technology

A. Brinkmann, K. Mohror, W. Yu, P. Carns, T. Cortes, S. A. Klasky, A. Miranda, F-J. Pfreundt, R. B. Ross, and M-A. Vef
GekkoFS — A Temporary Burst Buffer File System for HPC Applications

Journal of Computer Science and Technology

M-A. Vef, N. Moti, T. Süß, M. Tacke, T. Tocci, R. Nou, A. Miranda, T. Cortes, and A. Brinkmann
Fluid–structure interaction simulations outperform computational fluid dynamics in the description of thoracic aorta haemodynamics and in the differentiation of progressive dilation in Marfan syndrome patients

Royal Society Open Science

R.. Pons, A.. Guala, J.. F. Rodríguez-Palomares, J.. C. Cajas, L.. Dux-Santoy, G.. Teixidó-Tura, J.. J. Molins, M.. Vázquez, A.. Evangelista, and J.. Martorell
FragPELE: Dynamic Ligand Growing within a Binding Site. A Novel Tool for Hit-To-Lead Drug Design

Journal of Chemical Information and Modeling

C. Perez, D. Soler, R. Soliva, and V. Guallar

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