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2012
Arcella, A., Portella, G., Ruiz, M.L., Eritja, R., Vilaseca, M., Gabelica, V. & Orozco, M. Structure of triplex DNA in the gas phase. Journal of the American Chemical Society 134, 6596-606 (2012).
Meister, D., Kaiser, J., Brinkmann, A., Cortes, T., Kuhn, M. & Kunkel, J. A Study on Data Deduplication in HPC Storage Systems. Supercomputing 2012 (2012).
Goiri, Í., Julià, F., Fitó, O., Macías, M. & Guitart, J. Supporting CPU-based Guarantees in Cloud SLAs via Resource-level QoS Metrics. Future Generation Computer Systems Vol. 28 (8), 1295-1302 (2012).
Gajinov, V., Stipić, S., Unsal, O.S., Harris, T., Ayguadé, E. & Cristal, A. Supporting Stateful Tasks in a Dataflow Graph. Proceedings of the 21st international conference on Parallel architectures and compilation techniques 435–436 (2012).
Badia, R.M., Labarta, J., Marjanovic, V., F., M.A., Mayo, R., Quintana-Ortí, E.S. & Reyes, R. Symmetric Rank-k Update on Clusters of Multicore Processors with SMPSs. Applications, Tools and Techniques on the Road to Exascale Computing (2012).
Bertran, R., Buyuktosunoglu, A., Gupta, M.S., González, M. & Bose, P. Systematic Energy Characterization of CMP/SMT Processor Systems via Automated Micro-Benchmarks. International Symposium on Microarchitecture (2012).at <http://www.microsymposia.org/micro45/>
Bertran, R., Gonzalez Tallada, M., Martorell, X., Navarro, N. & Ayguadé, E. A Systematic Methodology to Generate Decomposable and Responsive Power Models for CMPs. Computers, IEEE Transactions on PP, 1 (2012).
Stipić, S., Tomić, S., Zyulkyarov, F., Cristal, A., Ünsal, O.S. & Valero, M. TagTM - accelerating STMs with hardware tags for fast meta-data access. DATE 39-44 (2012).
Munguía, L.-M., Bader, D.A. & Ayguade, E. Task-based Parallel Breadth-First Search in Heterogeneous Environments. Proc. of the annual IEEE International Conference on High Performance Computing (HiPC) (2012).at <http://www.hipc.org/hipc2013/index.php>
Scaini, C., Folch, A. & Navarro, M. Tephra hazard assessment at Concepción Volcano, Nicaragua. Journal of Volcanology and Geothermal Research 219-220, 41-51 (2012).
Fernández-Recio, J. & Verma, C. Theory and simulation: complexity and emergence. Current opinion in structural biology 22, 127-9 (2012).
Owen, H. & Codina, R. A third order velocity correction scheme obtained at the discrete level. Int. J. Numer. Meth. Fluids 69, 52-72 (2012).
Radojkovic, P., Cakarevic, V., Verdú, J., Pajuelo, A., Cazorla, F.J., Nemirovsky, M. & Valero, M. Thread Assignment of Multithreaded Network Applications in Multicore/Multithreaded Processors. IEEE Transactions on Parallel and Distributed Systems XX, (2012).
Pelties, C., de la Puente, J., Ampuero, J.-P., Brietzke, G.B. & Käser, M. Three-dimensional dynamic rupture simulation with a high-order discontinuous Galerkin method on unstructured tetrahedral meshes. J. Geophys. Res. 117, B02309 (2012).
The tomato genome sequence provides insights into fleshy fruit evolution. Nature 485, 635-41 (2012).
Alonso, P., Badia, R.M., Labarta, J., Barreda, M., Dolz, M.F., Mayo, R., Quintana-Ortí, E.S. & Reyes, R. Tools for Power-Energy Modelling and Analysis of Parallel Scientific Applications. The 41st International Conference on Parallel Processing 420–429 (2012).
Berral, J.L., Goiri, Í., Nou, R., Julià, F., Fitó, O., Guitart, J., Gavaldà, R. & Torres, J. Toward Energy-aware Scheduling using Machine Learning. Energy Efficient Distributed Computing Systems 215-244 (2012).doi:http://dx.doi.org/10.1002/9781118342015.ch8
Tomić, S. Towards a High-Performance Hardware Transactional Memory. (2012).
Rubio-Campillo, X., Valdès, P., Yubero, M. & Ble, E. Tracing a Roman siege from Late Roman Republic wars in Puig Ciutat (North-Eastern Iberian Peninsula). VIIth Fields of Conflict Conference (2012).
Gayatri, R., Badia, R.M., Ayguadé, E., Lujan, M. & Watson, I. Transactional Access to Shared Memory in StarSs, a Task Based Programming Model. 18th International Conference, Euro-Par 2012 514–525 (2012).
Negi, A., Armejach, A., Cristal, A., Unsal, O. & Stenström, P. Transactional prefetching: narrowing the window of contention in hardware transactional memory. Parallel Architectures and Compilation Techniques (PACT) 181-190 (2012).
Monteiro, A., Carvalho, A., Ribeiro, I., Scotto, M., Barbosa, S., Alonso, A., Baldasano, J.M., Pay, M.T., Miranda, A.I. & Borrego, C. Trends in ozone concentrations in the Iberian Peninsula by quantile regression and clustering. Atmospheric Environment 56, 184 - 193 (2012).
Yu, M.A., Egawa, T., Shinzawa-Itoh, K., Yoshikawa, S., Guallar, V., Yeh, S.-R., Rousseau, D.L. & Gerfen, G.J. Two tyrosyl radicals stabilize high oxidation States in cytochrome C oxidase for efficient energy conservation and proton translocation. Journal of the American Chemical Society 134, 4753-61 (2012).
Canela-Xandri, O., Julià, A., Gelpí, J.L. & Marsal, S. Unveiling case-control relationships in designing a simple and powerful method for detecting gene-gene interactions. Genetic epidemiology 36, 710-6 (2012).
Guevara, M., Arévalo, G., Gassó, S., Martínez, F., Soret, A., Ferrer, G. & Baldasano, J.M. Updating and Improvement of the High-resolution (1km x 1km, 1h) Emission Model for Spain: HERMES v.2.0. 15th GEIA Conference Emissions to Address Science & Policy Needs , 1-29 (2012).
Tomić, S., Cristal, A., Unsal, O. & Valero, M. Using Dynamic Runtime Testing for Rapid Development of Architectural Simulators. International Journal of Parallel Programming (2012).
Lucas, F., Masone, D., Saen-oon, S., Wallrapp, F. & Guallar, V. Using QM/MM Methods for the Exploration of Electron Transfer Pathways. Current Inorganic Chemistry 2, 263-272 (2012).
Marras, S. Variational Multiscale Stabilization of Finite and Spectral Elements for Dry and Moist Atmospheric Problems. (2012).
Marras, S., Kelly, J.F., Giraldo, F.X. & Vázquez, M. Variational Multiscale Stabilization of High-Order Spectral Elements for the Convection-Diffusion Equation. Journal (2012).
Marras, S., Moragues, M., Vázquez, M., Jorba, O. & Houzeaux, G. A Variational Multiscale Stabilized Finite Element Method for the Solution of the Euler Equations of Nonhydrostatic Stratified Flows. Submitted to J. Comp. Phys. (2012).doi:http://dx.doi.org/10.1016/j.jcp.2012.10.056
Hayes, T., Palomar, O., Unsal, O., Cristal, A. & Valero, M. Vector Extensions for Decision Support DBMS Acceleration. The 45th Annual IEEE/ACM International Symposium on Microarchitecture (MICRO45) 166-176 (2012).doi:10.1109/MICRO.2012.24
Queralt, A. & Teniente, E. Verification and Validation of UML Conceptual Schemas with OCL Constraints. ACM Transactions on Software Engineering and Methodology 21, 13 (2012).
Scaini, C., Folch, A. & Navarro, M. Volcanic ash hazard from Concepción volcano, Nicaragua. Journal of Volcanology and Geothermal Research 219, 41-51 (2012).
Baldasano, J.M. WCES panel: Weather and Air Quality. PRACE Scientific Case Update Workshop , (2012).
Baldasano, J.M., Terradellas, E. & Cuevas, E. WMO SDS-WAS programme. Regional Center for Northern Africa, Middle East and Europe. Activity Report 2010-2012. Meeting WMO SDS-WAS RSG Asia, Meteorological Research Institute , (2012).
2011
Carpenter, P., Ramirez, A. & Ayguadé, E. The Abstract Streaming Machine: Compile-Time Performance Modelling of Stream Programs on Heterogeneous Multiprocessors. Transactions on HiPEAC 5, (2011).
Iqbal, W., Dailey, M., Carrera, D. & Janecek, P. Adaptive resource provisioning for read intensive multi-tier applications in the cloud. Future Generation Computer Systems 27, 871–879 (2011).
Berral, J.L., Gavaldà, R. & Torres, J. Adaptive Scheduling on Power-Aware Managed Data-Centers using Machine Learning. The IEEE International Conference on GRID Computing (GRID 2011), Lyon, France, September 22-23 2011. (2011).
Basart, S., Pay, M.T., Pérez, C., Jorba, O. & Baldasano, J.M. Aerosol surface levels, chemical composition and optical depth over Europe in the CALIOPE air quality modelling system. 8th European Geosciences Union Conference (EGU) General Assembly. Geophysical Research Abstracts 13, (2011).
Basart, S., Pay, M.T., Jorba, O., Pérez, C., Jiménez-Guerrero, P., Schulz, M. & Baldasano, J.M. Aerosols in the CALIOPE air quality modelling system: validation and analysis of PM levels, optical depths and chemical composition over Europe. Atmospheric Chemistry and Physics Discussions 11, 20575–20629 (2011).
Montañola-Sales, C., Onggo, S. & Casanovas-Garcia, J. Agent-based simulation validation: A case study in demographic simulation. Proceedings of the 3rd International Conference on Advances in System Simulation (SIMUL11) 109-115 (2011).
Baldasano, J.M., Pay, M.T., Jorba, O., Gassó, S. & Jiménez-Guerrero, P. An annual assessment of air quality with the CALIOPE modeling system over Spain. Science of the Total Environment 409, 2163-2178 (2011).
Kormann, J., Biescas, B., Korta, N., de la Puente, J. & Sallarès, V. Application of acoustic full waveform inversion to retrieve high-resolution temperature and salinity profiles from synthetic seismic data. J. Geophys. Res. 116, C11039 (2011).
Araya-Polo, M., Cabezas, J., Hanzich, M., Pericas, M., Morancho, E., Gelado, I., Shafiq, M., Rubio, F., Cela, J.M., Ayguadé, E., Navarro, N. & Valero, M. Assessing Accelerator-based HPC Reverse Time Migration. Transactions on Parallel and Distributed Systems, Special Issue on Accelerators 22(1), 147-162 (2011).
Jorba, O., Dabdub, D., Baldasano, J.M., Spada, M. & Badia, A. Assessing the impact of NO2 photo-excitation at global scale. 8th European Geosciences Union Conference (EGU) General Assembly. Geophysical Research Abstracts 13, (2011).
Rincón, A., Jorba, O., Baldasano, J.M. & Monache, D.L. Assessment of short-term irradiance forecasting based on post-processing tools applied on WRF meteorological simulations. "State-of-the-Art" Workshop. COST ES 1002: WIRE: Weather Intelligence for Renewable Energies 1-9 (2011).
Pérez, C., Haustein, K., Janjic, Z., Jorba, O., Hunees, N., Baldasano, J.M., Black, T., Basart, S., Nickovic, S., Miller, L., Perlwitz, P., Schulz, M. & Thomson, M. Atmospheric dust modeling from meso to global scales with the online NMMB/BSC-Dust model – Part 1: Model description, annual simulations and evaluation. Atmospheric Chemistry and Physics Discussion 11, 17551-17620 (2011).
Haustein, K., Pérez, C., Baldasano, J.M., Jorba, O., Basart, S., Miller, L., Janjic, Z., Black, T., Nickovic, S., Todd, M.C. & Washington, R. Atmospheric dust modeling from meso to global scales with the online NMMB/BSC-Dust model – Part 2: Experimental campaigns in Northern Africa. Atmospheric Chemistry and Physics Discussion 11, 30273-30331 (2011).
Pérez, C., Haustein, K., Janjic, Z., Jorba, O., Huneeus, N., Baldasano, J.M., Black, T., Basart, S., Nickovic, S., Miller, R.L., Perlwitz, J.P., Schulz, M. & Thomson, M. Atmospheric dust modeling from meso to global scales with the online NMMB/BSC-Dust model – Part 1: Model description, annual simulations and evaluation. Atmospheric Chemistry and Physics 11, 13001–13027 (2011).
González, C., Fernández, M., Jiménez, D., Álvarez, C. & Martorell, X. Automatic Generation and Testing of Application Specific Hardware Accelerators on a New Reconfigurable OpenSPARC Platform. 5th HiPEAC Workshop on Reconfigurable Computing (WRC 2011) 85-94 (2011).

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