Alfonso Valencia

2023

• Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing

  Nature Genetics

  I. Cortés-Ciriano, J. June- Koo Lee, R. Xi, D. Jain, Y. L. Jung, L. Yang, D. Gordenin, L. J. Klimczak, C-Z. Zhang, D. S. Pellman, et al.
• Lessons Learned from a Performance Analysis and Optimization of a Multiscale Cellular Simulation

  PASC '23: Platform for Advanced Scientific Computing ConferenceProceedings of the Platform for Advanced Scientific Computing Conference

  A. Huebl, C. Silvano, T. Robinson, M. Clascà, M. Garcia-Gasulla, A. Montagud, J. Carbonell Caballero, and A. Valencia
• eTRANSAFE: data science to empower translational safety assessment

  Nature Reviews Drug Discovery

  F. Sanz, F. Pognan, T. Steger-Hartmann, C. Díaz, S. Asakura, A. Amberg, N. Bécourt-Lhote, N. Blomberg, N. Bosc, K. Briggs, F. Bringezu, C. Brulle-Wohlhueter, S. Brunak, R. Bueters, G. Callegaro, S. Capella-Gutierrez, E. Centeno, J. Corvi, M. T. D. Cronin, P. Drew, G. Duchateau-Nguyen, G. F. Ecker, S. Escher, E. Felix, M. Ferreiro, M. Frericks, L. I. Furlong, R. Geiger, C. George, M. Grandits, D. Ivanov-Draganov, J. Kilgour-Christie, T. Kiziloren, J. A. Kors, N. Koyama, A. Kreuchwig, A. R. Leach, M-A. Mayer, P. Monecke, W. Muster, C. Miyamoto Nakazawa, G. Nicholson, R. Parry, M. Pastor, J. Piñero, N. Oberhauser, J. Manuel Ramírez-Anguita, A. Rodrigo, A. Smajic, M. Schaefer, S. Schieferdecker, I. Soininen, E. Terricabras, P. Trairatphisan, S. C. Turner, A. Valencia, B. van de Water, J. L. van der Lei, E. M. van Mulligen, E. Vock, and D. Wilkinson
• Molecular bases of comorbidities: present and future perspectives

  Trends in Genetics

  J. Sánchez-Valle, and A. Valencia
• Low input capture Hi-C (liCHi-C) identifies promoter-enhancer interactions at high-resolutionAbstract

  Nature Communications

  L. Tomas-Daza, L. Rovirosa, P. López-Martí, A. Nieto-Aliseda, F. Serra, A. Planas-Riverola, O. Molina, R. McDonald, C. Ghevaert, E. Cuatrecasas, D. Costa, M. Camós, C. Bueno, P. Menéndez, A. Valencia, and B. M. Javierre
• Predicting the evolution of COVID-19 mortality risk: A recurrent neural network approach

  Computer Methods and Programs in Biomedicine Update

  M. Villegas, A. Gonzalez-Agirre, A. Gutiérrez-Fandiño, J. Armengol-Estapé, C. Pio Carrino, D. Pérez-Fernández, F. Soares, P. Serrano, M. Pedrera, N. García, and A. Valencia

2022

• Parallel model exploration for tumor treatment simulationsAbstract

  Computational Intelligence

  C. Akasiadis, M. Ponce‐de‐Leon, A. Montagud, E. Michelioudakis, A. Atsidakou, E. Alevizos, A. Artikis, A. Valencia, and G. Paliouras
• Parallel model exploration for tumor treatment simulations

  Computational Intelligence

  C. Akasiadis, M. Ponce‐de‐Leon, A. Montagud, E. Michelioudakis, A. Atsidakou, E. Alevizos, A. Artikis, A. Valencia, and G. Paliouras
• Look-alike humans identified by facial recognition algorithms show genetic similarities

  Cell Reports

  R. S. Joshi, M. Rigau, C. A. García-Prieto, M. Castro de Moura, D. Piñeyro, S. Morán, V. Davalos, P. Carrión, M. Ferrando-Bernal, I. Olalde, C. Lalueza-Fox, A. Navarro, C. Fernández-Tena, D. Aspandi, F. M. Sukno, X. Binefa, A. Valencia, and M. Esteller
• ECCB2022: the 21st European Conference on Computational Biology

  Bioinformatics

  S. Capella-Gutierrez, E. Alloza, L. Rubinat-Ripoll, A. Conesa, and A. Valencia