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2023

Local energetic frustration conservation in protein families and superfamilies

Nature Communications

M. I. Freiberger, V. Ruiz-Serra, C. Pontes, M. Romero-Durana, P. Galaz-Davison, C. A. Ramírez-Sarmiento, C. D. Schuster, M. A. Marti, P. G. Wolynes, D. U. Ferreiro, G. R. Parra, and A. Valencia

2022

2019

Blind prediction of homo‐ and hetero‐protein complexes: The CASP13‐CAPRI experiment

Proteins: Structure, Function, and Bioinformatics

M. F. Lensink, G. Brysbaert, N. Nadzirin, S. Velankar, R. A. G. Chaleil, T. Gerguri, P. A. Bates, E. Laine, A. Carbone, S. Grudinin, et al.

2017

LightDock: a new multi-scale approach to protein–protein docking

Bioinformatics

B. Jiménez-García, J. Roel-Touris, M. Romero-Durana, M. Vidal, D. Jiménez-González, and J. Fernández-Recio

2016

Modeling Binding Affinity of Pathological Mutations for Computational Protein Design

Computational Protein Design

M. Romero-Durana, C. Pallara, F. Glaser, and J. Fernandez-Recio
Modeling Binding Affinity of Pathological Mutations for Computational Protein Design

Computational Protein Design

M. Romero-Durana, C. Pallara, F. Glaser, and J. Fernandez-Recio
Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment

Proteins: Structure, Function, and Bioinformatics

M. F. Lensink, S. Velankar, A. Kryshtafovych, S-Y. Huang, D. Schneidman-Duhovny, A. Sali, J. Segura, N. Fernandez-Fuentes, S. Viswanath, R. Elber, et al.

2014

Structure and energetics of protein-RNA interactions: new insights from docking predictions.

XIV Congress of the Spanish Biophysical Society. Alcalá de Henares (Spain).

L.. Pérez-Cano, M. Romero-Durana, and J. Fernández-Recio

2013