Computational Biology

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Showing 1 - 30 results of 139

2022

Sex and gender bias in natural language processing

Elsevier Academic Press

D. Cirillo, H. Gonen, E. Santus, A. Valencia, M. R. Costa-jussà, and M. Villegas
Auditing the quality of datasets used in algorithmic decision-making systems

European Parliament. Directorate General for Parliamentary Research Services

I. de MiguelBeriain, P. Nicolás Jiménez, M. José Rementeria, D. Cirillo, A. Cortés, D. Saby, and G. Lazcoz Moratino
Optimizing Dosage-Specific Treatments in a Multi-Scale Model of a Tumor

Frontiers in Molecular Biosciences

M. Ponce-de-Leon, A. Montagud, C. Akasiadis, J. Schreiber, T. Ntiniakou, and A. Valencia
Design and methodological characteristics of studies using observational routinely collected health data for investigating the link between cancer and neurodegenerative diseases: Protocol for a meta-research study

BMJ Open

F. Catalá-López, J. A. Driver, M. J. Page, B. Hutton, M. Ridao, C. Berrozpe-Villabona, A. Alonso-Arroyo, C. A. Fraga-Medín, E. Bernal-Delgado, A. Valencia, and R. Tabarés-Seisdedos
Heterogeneous Infectivity and Pathogenesis of SARS-CoV-2 Variants Beta, Delta and Omicron in Transgenic K18-hACE2 and Wildtype Mice

Frontiers in Microbiology

F. Tarrés-Freixas, B. Trinité, A. Pons-Grífols, M. Romero-Durana, E. Riveira-Muñoz, C. Ávila-Nieto, M. Pérez, E. Garcia-Vidal, D. Perez-Zsolt, J. Muñoz-Basagoiti, D. Raïch-Regué, N. Izquierdo-Useros, C. Andrés, A. Antón, T. Pumarola, I. Blanco, M. Noguera-Julian, V. Guallar, R. Lepore, A. Valencia, V. Urrea, J. Vergara-Alert, B. Clotet, E. Ballana, J. Carrillo, J. Segalés, and J. Blanco
Evaluating the policy of closing bars and restaurants in Cataluña and its effects on mobility and COVID19 incidence

Scientific Reports

M. Smith, M. Ponce-de-Leon, and A. Valencia
Parallel model exploration for tumor treatment simulations

Computational Intelligence

C. Akasiadis, M. Ponce‐de‐Leon, A. Montagud, E. Michelioudakis, A. Atsidakou, E. Alevizos, A. Artikis, A. Valencia, and G. Paliouras
Mortality in Persons With Autism Spectrum Disorder or Attention-Deficit/Hyperactivity Disorder

JAMA Pediatrics

F. Catalá-López, B. Hutton, M. J. Page, J. A. Driver, M. Ridao, A. Alonso-Arroyo, A. Valencia, D. Macías Saint-Gerons, and R. Tabarés-Seisdedos
Clinical course impacts early kinetics,magnitude, and amplitude of SARS-CoV-2 neutralizing antibodies beyond 1 year after infection

Cell Reports Medicine

E. Pradenas, B. Trinité, V. Urrea, S. Marfil, F. Tarrés-Freixas, R. Ortiz, C. Rovirosa, J. Rodon, J. Vergara-Alert, and J. Segalés
Clinical course impacts early kinetics,magnitude, and amplitude of SARS-CoV-2 neutralizing antibodies beyond 1 year after infection

Cell Reports Medicine

E. Pradenas, B. Trinité, V. Urrea, S. Marfil, F. Tarrés-Freixas, R. Ortiz, C. Rovirosa, J. Rodon, J. Vergara-Alert, J. Segalés, V. Guallar, A. Valencia, N. Izquierdo-Useros, M. Noguera-Julian, J. Carrillo, R. Paredes, L. Mateu, A. Chamorro, R. Toledo, M. Massanella, B. Clotet, and J. Blanco
Detection of oncogenic and clinically actionable mutations in cancer genomes critically depends on variant calling tools

Bioinformatics

C. A. Garcia-Prieto, F. Martínez-Jiménez, A. Valencia, and E. Porta-Pardo
The structural coverage of the human proteome before and after AlphaFold

PLoS computational biology

E. Porta-Pardo, V. Ruiz-Serra, S. Valentini, and A. Valencia
The structural coverage of the human proteome before and after AlphaFold

PLoS computational biology

E. Porta-Pardo, V. Ruiz-Serra, S. Valentini, and A. Valencia
Sex and Gender Bias in Technology and Artificial Intelligence: Biomedicine and Healthcare Applications

Elsevier Academic Press

D. Cirillo, S. Catuara-Solarz, and E. Guney
Digital biomarkers and sex impacts in Alzheimer’s disease management — potential utility for innovative 3P medicine approach

EPMA Journal

R. L. Harms, A. Ferrari, I. B. Meier, J. Martinkova, E. Santus, N. Marino, D. Cirillo, S. Mellino, S. Catuara Solarz, I. Tarnanas, C. Szoeke, J. Hort, A. Valencia, M. Teresa Ferretti, A. Seixas, and A. Santuccion Chadha
Patient-specific Boolean models of signalling networks guide personalised treatments

eLife

A. Montagud, J. Béal, L. Tobalina, P. Traynard, V. Subramanian, B. Szalai, R. Alföldi, L. Puskás, A. Valencia, E. Barillot, J. Saez-Rodriguez, and L. Calzone

2021

Llibre blanc sobre la Intel·ligència Artificial aplicada a la salut (White paper on Artificial Intelligence applied to health)

CIDAI-LlibreBlanc-2021-02

F. Miralles, V. Ribas, C. Gallego, J. Guanyabens, M. Valls, D. Cirillo, A. Jené, C. Sierra, D. Gil, C. Sanchez, X. Llopis, K. Gisbert, and A. Vellido
Perspectives on emerging technologies, personalised medicine, and clinical research for cancer control in Latin America and the Caribbean

The Lancet Oncology

G. Werutsky, C. H. Barrios, A. F. Cardona, A. Albergaria, A. Valencia, C. G. Ferreira, C. Rolfo, E. de Azambuja, G. A. Rabinovich, G. Sposetti, O. Arrieta, R. Dienstmann, T. F. Rebelatto, V. Denninghoff, V. Aran, and E. Cazap
Unraveling the molecular basis of host cell receptor usage in SARS-CoV-2 and other human pathogenic β-CoVs

Computational and Structural Biotechnology Journal

C. Pontes, V. Ruiz-Serra, R. Lepore, and A. Valencia
BioFVM-X: An MPI+OpenMP 3-D Simulator for Biological Systems

G. Saxena, M. Ponce-de-Leon, A. Montagud, D. Vicente Dorca, and A. Valencia
STAG2 loss-of-function affects short-range genomic contacts and modulates the basal-luminal tra