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2023

Novel Spike-stabilized trimers with improved production protect K18-hACE2 mice and golden Syrian hamsters from the highly pathogenic SARS-CoV-2 Beta variant

Frontiers in Immunology

C. Ávila-Nieto, J. Vergara-Alert, P. Amengual-Rigo, E. Ainsua-Enrich, M. Brustolin, M. Luisa Rodr de la Concepción, N. Pedreño-Lopez, J. Rodon, V. Urrea, E. Pradenas, S. Marfil, E. Ballana, E. Riveira-Muñoz, M. Pérez, N. Roca, F. Tarrés-Freixas, J. Carabelli, G. Cantero, A. Pons-Grífols, C. Rovirosa, C. Aguilar-Gurrieri, R. Ortiz, A. Barajas, B. Trinité, R. Lepore, J. Muñoz-Basagoiti, D. Perez-Zsolt, N. Izquierdo-Useros, A. Valencia, J. Blanco, B. Clotet, V. Guallar, J. Segalés, and J. Carrillo
Methods in Molecular BiologyComputational Vaccine DesignNetCleave: An Open-Source Algorithm for Predicting C-Terminal Antigen Processing for MHC-I and MHC-II

R. Farriol-Duran, M. Vallejo-Vallés, P. Amengual-Rigo, M. Floor, and V. Guallar

2021

NetCleave: an open-source algorithm for predicting C-terminal antigen processing for MHC-I and MHC-II

Scientific Reports

P. Amengual-Rigo, and V. Guallar

2020

UEP: an open-source and fast classifier for predicting the impact of mutations in protein–protein complexesAbstractMotivationResultsAvailability and implementationSupplementary information

Bioinformatics

P. Amengual-Rigo, J. Fernández-Recio, and V. Guallar

2018

CHAPTER 10. Modeling O2-dependent Heme Enzymes: A Quick Guide for Non-experts

Dioxygen-dependent Heme Enzymes

F. Sancho, G. Santiago, P. Amengual-Rigo, and V. Guallar
Automated Design of Efficient and Functionally Diverse Enzyme Repertoires

Molecular Cell

O. Khersonsky, R. Lipsh, Z. Avizemer, iv, Y. Ashani, M. Goldsmith, H. Leader, O. Dym, S. Rogotner, D. L. Trudeau, J. Prilusky, P. Amengual-Rigo, V. Guallar, D. S. Tawfik, and S. J. Fleishman
Multiple implications of an active site phenylalanine in the catalysis of aryl-alcohol oxidase

Scientific Reports

J. Carro, P. Amengual-Rigo, F. Sancho, M. Medina, V. Guallar, P. Ferreira, and A. T. Martínez