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2016

Network analytics in the age of big data

Science

N.. Przulj, and N.. Malod-Dognin
A global genetic interaction network maps a wiring diagram of cellular function

Science

M.. Costanzo, B.. VanderSluis, E.. N. Koch, A.. Baryshnikova, C.. Pons, G.. Tan, W.. Wang, M.. Usaj, J.. Hanchard, S.. D. Lee, V.. Pelechano, E.. B. Styles, M.. Billmann, J.. van Leeuwen, N.. van Dyk, Z.-Y.. Lin, E.. Kuzmin, J.. Nelson, J.. S. Piotrowski, T.. Srikumar, S.. Bahr, Y.. Chen, R.. Deshpande, C.. F. Kurat, S.. C. Li, Z.. Li, M.. M. Usaj, H.. Okada, N.. Pascoe, B.-J.. San Luis, S.. Sharifpoor, E.. Shuteriqi, S.. W. Simpkins, J.. Snider, H.. G. Suresh, Y.. Tan, H.. Zhu, N.. Malod-Dognin, V.. Janjic, N.. Przulj, O.. G. Troyanskaya, I.. Stagljar, T.. Xia, Y.. Ohya, A.-C.. Gingras, B.. Raught, M.. Boutros, L.. M. Steinmetz, C.. L. Moore, A.. P. Rosebrock, A.. A. Caudy, C.. L. Myers, B.. Andrews, and C.. Boone
Graphlet-based Characterization of Directed Networks

Scientific Reports

A. Sarajlić, N. Malod-Dognin, Ö. Nebil Yaveroğlu, and N. Pržulj

2015

ergm.graphlets: A Package for ERG Modeling Based on Graphlet Statistics

Journal of Statistical Software

Ö. NebilYaveroğlu, S. M. Fitzhugh, M. Kurant, A. Markopoulou, C. T. Butts, and N. Pržulj
Topology-function conservation in protein–protein interaction networks

Bioinformatics

D. Davis, Ö. Nebil Yaveroğlu, N. Malod-Dognin, A. Stojmirovic, and N. Pržulj
L-GRAAL: Lagrangian graphlet-based network aligner

Bioinformatics

N. Malod-Dognin, and N. Pržulj
Proper evaluation of alignment-free network comparison methods

Bioinformatics

Ö. NebilYaveroğlu, T. Milenković, and N. Pržulj
Methods for biological data integration: perspectives and challenges

Journal of The Royal Society Interface

V. Gligorijević, and N. Pržulj

2014

GR-Align: fast and flexible alignment of protein 3D structures using graphlet degree similarity

Bioinformatics

N. Malod-Dognin, and N. Pržulj
The Topology of the Growing Human Interactome DataSummary

Journal of Integrative Bioinformatics

V. Janjić, and N. Pržulj

Pàgines