Josep Gelpi

2021

• An agenda-setting paper on data sharing platforms: euCanSHare workshop

  Open Research Europe

  T. Devriendt, C. Ammann, F. W. Asselbergs, A. Bernier, R. Costas, M. G. Friedrich, J. L. Gelpí, M-R. Jarvelin, K. Kuulasmaa, K. Lekadir, M. Th. Mayrhofer, V. Papez, G. Pasterkamp, S. E. Petersen, C. Oliver Schmidt, J. Schulz-Menger, S. Söderberg, M. Shabani, G. Veronesi, D. Steven Viezzer, and P. Borry
• Identifying causative mechanisms linking early-life stress to psycho-cardio-metabolic multi-morbidity: The EarlyCause project

  PLOS ONE

  N. Mariani, A. Borsini, C. A. M. Cecil, J. F. Felix, S. Sebert, A. Cattaneo, E. Walton, Y. Milaneschi, G. Cochrane, C. Amid, J. Rajan, J. Giacobbe, Y. Sanz, A. Agustí, T. Sorg, Y. Herault, J. Miettunen, P. Parmar, N. Cattane, V. Jaddoe, J. Lötjönen, C. Buisan, M. A. Gonzál Ballester, G. Piella, J. L. Gelpí, F. Lamers, B. W. J. H. Penninx, H. Tiemeier, M. von Tottleben, R. Thiel, K. F. Heil, M-R. Jarvelin, C. Pariante, I. M. Mansuy, and K. Lekadir

2020

• Butler enables rapid cloud-based analysis of thousands of human genomesAbstract

  Nature Biotechnology

  S. Yakneen, S. M. Waszak, M. Gertz, and J. O. Korbel
• 4D Genome Rewiring during Oncogene-Induced and Replicative Senescence

  Molecular Cell

  S. Sati, B. Bonev, Q. Szabo, D. Jost, P. Bensadoun, F. Serra, V. Loubiere, G. Lucio Papadopoulos, J-C. Rivera-Mulia, L. Fritsch, P. Bouret, D. Castillo, J. Ll. Gelpi, M. Orozco, C. Vaillant, F. Pellestor, F. Bantignies, M. A. Martí-Renom, D. M. Gilbert, J-M. Lemaitre, and G. Cavalli
• The Quest for Orthologs benchmark service and consensus calls in 2020Abstract

  Nucleic Acids Research

  A. M. Altenhoff, J. Garrayo-Ventas, S. Cosentino, D. Emms, N. M. Glover, A. Hernández-Plaza, Y. Nevers, V. Sundesha, D. Szklarczyk, J. M. Fernández, L. Codó, the. Quest for Consortium, J. Ll Gelpi, J. Huerta-Cepas, W. Iwasaki, S. Kelly, O. Lecompte, M. Muffato, M. J. Martin, S. Capella-Gutierrez, P. D. Thomas, E. Sonnhammer, and C. Dessimoz
• Bioactive Conformational Ensemble Server and Database. A Public Framework to Speed Up In Silico Drug DiscoveryBioactive Conformational Ensemble Server and Database. A Public Framework to Speed Up In Silico Drug Discovery

  Journal of Chemical Theory and Computation

  S. Zivanovic, G. Bayarri, F. Colizzi, D. Moreno, J. Lluis Gelpí, R. Soliva, A. Hospital, and M. Orozco
• Sex differences in oncogenic mutational processes

  Nature Communications

  C. H. Li, S. D. Prokopec, R. X. Sun, F. Yousif, N. Schmitz, P. C. Boutros, and
• Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samplesAbstract

  Nature Communications

  M. H. Bailey, W. U. Meyerson, L. Jonathan Dursi, L-B. Wang, G. Dong, W-W. Liang, A. Weerasinghe, S. Li, Y. Li, S. Kelso, G. Saksena, K. Ellrott, M. C. Wendl, D. A. Wheeler, G. Getz, J. T. Simpson, M. B. Gerstein, and L. Ding
• Pan-cancer analysis of whole genomes

  Nature
• The Devices, Experimental Scaffolds, and Biomaterials Ontology (DEB): A Tool for Mapping, Annotation, and Analysis of Biomaterials' Data

  Advanced Functional Materials

  O. Hakimi, J L. Gelpí, M. Krallinger, F. Curi, D. Repchevsky, and M‐P. Ginebra