Anais Baudot

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Biography

I'm a CNRS researcher in Systems Biology, leading the group dedicated to Networks and Systems Biology for Diseases in the Marseille Medical Genetic Unit (MMG), with an affiliation to the BSC. My main interests are to develop network-based approaches to study human diseases, thanks to network modeling and network mining strategies, with a particular emphasis on rare diseases and disease comorbidities.

Research

The full list of my publication is available here.

Selected publications :

1: Forés-Martos J, Catalá-López F, Sánchez-Valle J, Ibáñez K, Tejero H, Palma-Gudiel H, Climent J, Pancaldi V, Fañanás L, Arango C, Parellada M, Baudot A, Vogt D, Rubenstein JL, Valencia A, Tabarés-Seisdedos R. Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer. Mol Autism. 2019 Apr 8;10:17. doi:
10.1186/s13229-019-0262-8

2: Valdeolivas A, Tichit L, Navarro C, Perrin S, Odelin G, Levy N, Cau P, Remy E, Baudot A. Random walk with restart on multiplex and heterogeneous biological networks. Bioinformatics. 2019 Feb 1;35(3):497-505. doi:10.1093/bioinformatics/bty637

3: Sánchez-Valle J, Tejero H, Ibáñez K, Portero JL, Krallinger M, Al-Shahrour F, Tabarés-Seisdedos R, Baudot A, Valencia A. A molecular hypothesis to explain direct and inverse co-morbidities between Alzheimer's Disease, Glioblastoma and Lung cancer. Sci Rep. 2017 Jun 30;7(1):4474. doi: 10.1038/s41598-017-04400-6

4: Tabarés-Seisdedos R, Baudot A. Editorial: Direct and Inverse Comorbidities Between Complex Disorders. Front Physiol. 2016 Mar 30;7:117. doi:10.3389/fphys.2016.00117

5: Ibáñez K, Boullosa C, Tabarés-Seisdedos R, Baudot A, Valencia A. Molecular evidence for the inverse comorbidity between central nervous system disorders and cancers detected by transcriptomic meta-analyses. PLoS Genet. 2014 Feb 20;10(2):e1004173. doi: 10.1371/journal.pgen.1004173

6: Glaab E, Baudot A, Krasnogor N, Schneider R, Valencia A. EnrichNet:network-based gene set enrichment analysis. Bioinformatics. 2012 Sep15;28(18):i451-i457. doi: 10.1093/bioinformatics/bts389