Publications

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M. T. Pay, Piot, M., Jiménez-Guerrero, P., Jorba, O., Pérez, C., Baldasano, J. M., Querol, X., Pandolfi, M., and Alastuey, A., Chemical composition of particulate matter from a high-resolution Air Quality Modelling System over Spain. AAAR09, 28th Annual Conference, Minneapolis (Minnesota, USA), 2009.
M. T. Pay, Pay, M. T., Piot, M., Jorba, O., Basart, S., Gassó, S., Dabdub, D., Jiménez-Guerrero, P., and Baldasano, J. M., Chemical Composition of Particulate Matter in Spain: Modeling Evaluation of the CALIOPE System for 2004. Geophysical Research Abstracts, Vol. 12, EGU2010-5279. Viena, 2010.
G. Houzeaux and Codina, R., A Chimera method based on a Dirichlet/Neumann(Robin) coupling for the Navier-Stokes equations. Comp. Meth. Appl. Mech. Eng., 2003.
M. Vázquez, Houzeaux, G., and Codina, R., Chimera type domain decomposition methods applied to fractional step finite element. Barcelona (Spain)., 2000.
E. Vallejo, Galluzzi, M., Cristal, A., Vallejo, F., Beivide, R., Stenström, P., Smith, J. E., and Valero, M., Chip Multiprocessors with Implicit Transactions, 2006 Advanced Computer Architecture and Compilation for Embedded Systems (ACACES-06). Academia Press, L'Aquila, Italy, pp. 167–170, 2006.
F. Artigas, Marti, A., Yao, N., and Pechmann, I., Chlorophyll Detection and Mapping of Shallow Water Impoundments Using Image Spectrometry, Research Letters in Ecology, vol. 2008. 2008.
L. Valentova, Gallovic, F., Ruzek, B., de la Puente, J., and Moczo, P., Choice of regularization in adjoint tomography based on 2D synthetic tests, Geophysical Journal International, vol. 202, no. 2. pp. 787-799, 2015.
R. Collepardo-Guevara, Portella, G., Vendruscolo, M., Frenkel, D., Schlick, T., and Orozco, M., Chromatin Unfolding by Epigenetic Modifications Explained by Dramatic Impairment of Internucleosome Interactions: A Multiscale Computational Study., J Am Chem Soc, vol. 137, no. 32. pp. 10205-15, 2015.
A. Seyedi, Armejach, A., Cristal, A., Unsal, O., Hur, I., and Valero, M., Circuit Design of a Dual-Versioning L1 Data Cache, Integration The VLSI Journal, 2011.
A. Seyedi, Armejach, A., Cristal, A., Unsal, O., Hur, I., and Valero, M., Circuit Design of a Dual-Versioning L1 Data Cache for Optimistic Concurrency, 21st Great Lakes Symposium on Very Large Scale Integration (GLSVLSI'11). Lausanne, Swaziland, 2011.
A. Seyedi, Yalcin, G., Unsal, O., and Cristal, A., Circuit Design of a Novel Adaptable and Reliable L1 Data Cache, 23rd ACM international conference on Great lakes symposium on VLSI. Paris, France, 2013.
V. Valverde, Pay, M. T., and Baldasano, J. M., Circulation-type classification derived on a climatic basis to study air quality dynamics over the Iberian Peninsula, Article. International Journal of Climatology, 2014.
F. M. Lucas, Cisplatin, still a long way to go, TACC-2012, Theory and Applications in Computational Chemistry. Pavia, Lombardia, Italy. 2012.
A. Soret, Ciudades como centros de modelización científica . Biosfera y ciudades-The club of Rome-, Barcelona, 2015.
R. Sulpizio, Folch, A., Costa, A., Scaini, C., and Dellino, P., Civil aviation hazard assessment of far-range volcanic ash dispersal from a violent Strombolian eruption scenario at Somma-Vesuvius volcano, Naples, Italy, Bulletin of volcanology. 2012.
M. Macías and Guitart, J., Client Classification Policies for SLA Enforcement in Shared Cloud Datacenters, 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid'12). IEEE Computer Society, Ottawa, Canada, pp. 156-163, 2012.
M. Macías and Guitart, J., Client Classification Policies for SLA Negotiation and Allocation in Shared Cloud Datacenters, Lecture Notes on Computer Science (LNCS), 8th International Workshop on Economics of Grids, Clouds, Systems, and Services (GECON'11), vol. 7150. Paphos, Cyprus, pp. 90-104, 2011.
J. M. Baldasano, Climate Change and its realtion with ecosystems in the Central America & Caribbean context, EUCARINET/ENLACE Europe, Central America&Caribbean: Climate Change and Biodiversity Dialogue Workshop, vol. . ENLACE and EUCARINET, 22-23 April, 2013. Ciudad de Panamá (Panamá) , 2013.
J. M. Baldasano, Climate Change. From the Science to the Society. Tertulias Hispano-Británicas, 2005.
F. Javier Doblas-Reyes, Climate information for the next 30 years . CLIVAR-ES, Tortosa, Spain, 2015.
V. Guemas and Doblas-Reyes, F. Javier, Climate prediction and climate services . BSC industrial seminar, Barcelona, Spain, 2015.
F. Javier Doblas-Reyes, Climate prediction and climate services. SPARC Regional Meeting, Granada, Spain, 2015.
F. Javier Doblas-Reyes, Climate prediction for climate services. Joint SPECS-MiKlip workshop, Offenbach, Germany, 2015.
F. J. Doblas-Reyes, Climate prediction in a user-driven context. Seminar at the Nansen Environmental and Remote Sensing Center, Bergen, Norway, 2015.
F. Doblas-Reyes, Davis, M., Torralba-Fernandez, V., and Pinto-Biescas, A., Climate Services for energy . CLIVAR-ES, Tortosa, Spain, 2015.
J. M. Baldasano, Valverde, V., and Pay, M. T., Climatic synoptic classification over the Iberian Peninsula, 25th GLOREAM-EURASAP Workshop on Tropospheric Chemical Transport Modelling. 25th GLOREAM-EURASAP Workshop on Tropospheric Chemical Transport Modelling, Aveiro (Portugal) 6-7 November, 2014.
R. Pedros, Estellés, V., Sicard, M., Gomez-Amo, J. L., Utrillas, M. P., Martínez-Lozano, J. A., Rocadenbosch, F., Pérez, C., and Baldasano, J. M., Climatology of the Aerosol Extinction-to-Backscatter Ratio from Sun-Photometric Measurements, IEEE Transactions on Geoscience and Remote Sensing, vol. 48, no. 1. IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC, UNITED STATES, pp. 237-249, 2010.
S. Sanyal, Roy, S., Cristal, A., Unsal, O., and Valero, M., Clock gate on abort: Towards energy-efficient hardware Transactional Memory, 23rd IEEE International Symposium on Parallel {&} Distributed Processing (IPDPS 2009). IEEE, Rome, Italy, pp. 1–8, 2009.
X. J. Collazo-Mojica, Sadjadi, S. M., Ejarque, J., and Badia, R. M., Cloud Application Resource Mapping and Scaling Based on Monitoring of QoS Constraints, The 24th International Conference on Software Engineering and Knowledge Engineering (SEKE'12). Knowledge Systems Institute Graduate School, San Francisco, United States, pp. 88–93, 2012.
E. Tejedor, Ejarque, J., Lordan, F., Rafanell, R., Álvarez, J., Lezzi, D., Sirvent, R., and Badia, R. M., A Cloud-unaware Programming Model for Easy Development of Composite Services, Third IEEE International Conference on Coud Computing Technology and Science. IEEE, pp. 375–382, 2011.
O. Jorba, Pérez, C., Rocadenbosch, F., and Baldasano, J. M., Cluster Analysis of 4-Day Back Trajectories Arriving in the Barcelona Area (Spain) from 1997 to 2002, Journal of Applied Meteorology, vol. 43, no. 6. AMER METEOROLOGICAL SOC, UNITED STATES, pp. 887-901, 2004.
R. González, Cristal, A., Veidenbaum, A., Pericàs, M., and Valero, M., A clustered Processor based on Content-Aware Register File. Computer Architecture Department, Universitat Politècnica de Catalunya (UPC), 2004.
N. S. Fučkar, Guemas, V., Johnson, N. C., Massonnet, F., and Doblas-Reyes, F. J., Clusters of interannual sea ice variability in the northern hemisphere, Climate Dynamics. Springer Berlin Heidelberg, pp. 1-17, 2015.
E. Tejedor, Farreras, M., Grove, D., Badia, R. M., Almasi, G., and Labarta, J., ClusterSs: a Task-based Programming Model for Clusters, Proceedings of the 20th International ACM Symposium on High Performance Distributed Computing, San Jose, California, USA. pp. 267–268, 2011.
M. Orozco, Orellana, L., Hospital, A., Naganathan, A. N., Emperador, A., Carrillo, O., and Gelpí, J. L., Coarse-grained representation of protein flexibility. Foundations, successes, and shortcomings., Advances in protein chemistry and structural biology, vol. 85. pp. 183-215, 2011.
C. Laughton, Orozco, M., and Vranken, W., COCO: A simple tool to enrich the representation of conformational variability in NMR structures. Proteins, 75, 206-216, 2009.
A. Ramirez, Barroso, L. A., Gharachorloo, K., Cohn, R., Larriba-Pey, J. L., Lowney, G., and Valero, M., Code Layout Optimizations for Transaction Processing Workloads, 28th Annual International Symposium on Computer Architecture (ISCA-28). Göteborg (Sweden), pp. 155-164, 2001.
L. Vilanova, Ben-Yehuda, M., Navarro, N., Etsion, Y., and Valero, M., CODOMs: Protecting Software with Code-centric Memory Domains, 41st International Symposium on Computer Architecture (ISCA). Minneapolis, MN, United States, 2014.
L. Álvarez, Vilanova, L., Moreto, M., Casas, M., González, M., Martorell, X., Navarro, N., Ayguadé, E., and Valero, M., Coherence Protocol for Transparent Management of Scratchpad Memories in Shared Memory Manycore Architectures, Proceedings of the 42nd International Symposium on Computer Architecture (ISCA). ACM, New York, NY, USA, pp. 720-732, 2015.
E. Sánchez, Kleiber, R., Hatzky, R., Borchardt, M., Monreal, P., Castejón, F., López-Fraguas, A., Sáez, X., Velasco, J. L., Calvo, I., Alonso, A., and López-Bruna, D., Collisionless damping of flows in the TJ-II stellarator, Plasma Physics and Controlled Fusion, vol. 55. p. 014015, 2013.
X. Rubio-Campillo and Hernández, F. X., Combined arms warfare in the Spanish Civil War, VIIth Fields of Conflict Conference. Budapest, 2012.
X. Rubio-Campillo and Hernández, F. X., Combined Arms Warfare in the Spanish Civil War: The Assault on the Republican Defence Line at Fatarella Ridge, Journal of Conflict Archaeology, vol. 10. pp. 52-69, 2015.
N. Bayó-Puxan, Rodríguez-Mias, R., Goldflam, M., Kotev, M., Ciudad, S., Hipolito, C. J., Varese, M., Suga, H., Campos-Olivas, R., Barril, X., Guallar, V., Teixidó, M., García, J., and Giralt, E., Combined Use of Oligopeptides, Fragment Libraries, and Natural Compounds: A Comprehensive Approach To Sample the Druggability of Vascular Endothelial Growth Factor, ChemMedChem. WILEY-VCH Verlag, p. n/a–n/a, 2015.
G. Yalcin, Sobe, A., Voronin, A., Wamhoff, J. - T., Harmanci, D., Cristal, A., Unsal, O., Felber, P., and Fetzer, C., Combining Error Detection and Transactional Memory for Energy-efficient Computing below Safe Operation Margins, 22nd Euromicro International Conference on Parallel, Distributed, and Network-Based Processing. Turin, Italy, 2014.
I. H. Moal and Fernandez-Recio, J., Comment on 'protein-protein binding affinity prediction from amino acid sequence'., Bioinformatics, vol. 31, no. 4. pp. 614-5, 2015.
S. J. Fleishman, Whitehead, T. A., Strauch, E. - M., Corn, J. E., Qin, S., Zhou, H. - X., Mitchell, J. C., Demerdash, O. N. A., Takeda-Shitaka, M., Terashi, G., Moal, I. H., Li, X., Bates, P. A., Zacharias, M., Park, H., Ko, J. -su, Lee, H., Seok, C., Bourquard, T., Bernauer, J., Poupon, A., Azé, J., Soner, S., Ovali, S. K., Ozbek, P., Tal, N. B., Haliloglu, T., Hwang, H., Vreven, T., Pierce, B. G., Weng, Z., Pérez-Cano, L., Pons, C., Fernández-Recio, J., Jiang, F., Yang, F., Gong, X., Cao, L., Xu, X., Liu, B., Wang, P., Li, C., Wang, C., Robert, C. H., Guharoy, M., Liu, S., Huang, Y., Li, L., Guo, D., Chen, Y., Xiao, Y., London, N., Itzhaki, Z., Schueler-Furman, O., Inbar, Y., Potapov, V., Cohen, M., Schreiber, G., Tsuchiya, Y., Kanamori, E., Standley, D. M., Nakamura, H., Kinoshita, K., Driggers, C. M., Hall, R. G., Morgan, J. L., Hsu, V. L., Zhan, J., Yang, Y., Zhou, Y., Kastritis, P. L., Bonvin, A. M. J. J., Zhang, W., Camacho, C. J., Kilambi, K. P., Sircar, A., Gray, J. J., Ohue, M., Uchikoga, N., Matsuzaki, Y., Ishida, T., Akiyama, Y., Khashan, R., Bush, S., Fouches, D., Tropsha, A., Esquivel-Rodríguez, J., Kihara, D., Stranges, B. P., Jacak, R., Kuhlman, B., Huang, S. - Y., Zou, X., Wodak, S. J., Janin, J., and Baker, D., Community-wide assessment of protein-interface modeling suggests improvements to design methodology., Journal of molecular biology, vol. 414, no. 2. pp. 289-302, 2011.
R. Moretti, Fleishman, S. J., Agius, R., Torchala, M., Bates, P. A., Kastritis, P. L., Rodrigues, J. P. G. L. M., Trellet, M., Bonvin, A. M. J. J., Cui, M., Rooman, M., Gillis, D., Dehouck, Y., Moal, I., Romero-Durana, M., Perez-Cano, L., Pallara, C., Jimenez, B., Fernández-Recio, J., Flores, S., Pacella, M., Praneeth Kilambi, K., Gray, J. J., Popov, P., Grudinin, S., Esquivel-Rodríguez, J., Kihara, D., Zhao, N., Korkin, D., Zhu, X., Demerdash, O. N. A., Mitchell, J. C., Kanamori, E., Tsuchiya, Y., Nakamura, H., Lee, H., Park, H., Seok, C., Sarmiento, J., Liang, S., Teraguchi, S., Standley, D. M., Shimoyama, H., Terashi, G., Takeda-Shitaka, M., Iwadate, M., Umeyama, H., Beglov, D., Hall, D. R., Kozakov, D., Vajda, S., Pierce, B. G., Hwang, H., Vreven, T., Weng, Z., Huang, Y., Li, H., Yang, X., Ji, X., Liu, S., Xiao, Y., Zacharias, M., Qin, S., Zhou, H. - X., Huang, S. - Y., Zou, X., Velankar, S., Janin, J., Wodak, S. J., and Baker, D., Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions., Proteins, vol. 81, no. 11. pp. 1980-7, 2013.
E. Tejedor and Badia, R. M., COMP Superscalar: Bringing GRID superscalar and GCM Together, Proceedings of the 8th IEEE International Symposium on Cluster Computing and the Grid 2008, Lyon. 8th IEEE International Symposium on Cluster Computing and the Grid 2008, Lyon, 2008.
J. Ferreira, Guevara, M., Baldasano, J. M., Tchepel, O., Schaap, M., Miranda, A. I., and Borrego, C., A comparative analysis of atmospheric emission inventories available for Europe, 15th GEIA Conference Emissions to Address Science & Policy Needs, vol. . ACCENT-IGAC-GEIA, 11-13 June, 2012. Toulouse. France, pp. 1-1, 2012.
F. Spyrakis, Lucas, F., Bidon-Chanal, A., Viappiani, C., Guallar, V., and Luque, J. F., Comparative analysis of inner cavities and ligand migration in non-symbiotic AHb1 and AHb2., Biochimica et biophysica acta. 2013.

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