Publications

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A. Cilardo, Esposito, L., Veniero, A., Mazzeo, A., Beltran, V., and Ayguadé, E., A CellBE-based HPC Application for the Analysis of Vulnerabilities in Cryptographic Hash Functions. Melbourne, Australia , 2011.
C. Pons, Jiménez-González, D., ilia Gonzalez-Álvarez, C., Servat, H., Cabrera-Beni­tez, D., Aguilar, X., and Fernández-Recio, J., Cell-Dock: high-performance protein-protein docking, Bioinformatics. 2012.
C. Pons, Jiménez-González, D., González-Álvarez, C., Servat, H., Cabrera-Benítez, D., Aguilar, X., and Fernández-Recio, J., Cell-Dock: high-performance protein-protein docking., Bioinformatics (Oxford, England), vol. 28, no. 18. pp. 2394-6, 2012.
V. Beltran, Carrera, D., Torres, J., and Ayguadé, E., CellMT: A Cooperative Multithreading Library for the Cell/B.E.. 2009 International Conference on High Performance Computing (HiPC2009), 2009.
F. Cabarcas, Rico, A., Ródenas, D., Martorell, X., Ramirez, A., and Ayguadé, E., CellSim: A Cell Processor Simulation Infrastructure, 2007 Advanced Computer Architecture and Compilation for Embedded Systems (ACACES-07). pp. 279-282, 2007.
F. Cabarcas, Rico, A., Ródenas, D., Martorell, X., Ramirez, A., and Ayguadé, E., CellSim: A Validated Modular Heterogeneous Multiprocessor Simulator, XVIII Jornadas de Paralelismo de Zaragoza. Zaragoza (Spain), pp. 181-188, 2007.
P. Bellens, Pérez, J. M., Badia, R. M., and Labarta, J., CellSs: A Programming Model for the Cell BE Architecture. in proceedings of the ACM/IEEE SC 2006 Conference, 2006.
J. M. Pérez, Bellens, P., Badia, R. M., and Labarta, J., CellSs: Making it easier to Program the Cell Broadband Engine processor. IBM Journal of R&D, Volume 51, Number 5, 2007.
P. Bellens, Pérez, J. M., Cabarcas, F., Ramirez, A., Badia, R. M., and Labarta, J., CellSs: Scheduling Techniques to Better Exploit Memory Hierarchy. Scientific Programming, vol 17, pp. 77-95, 2009.
F. DiMaio, Rem, P., Lofti, S., Serranti, S., Bonifazi, G., Hu, M., Burganos, V., Skouras, E., Cucchietti, F., and Vázquez, M., Cement and Clean Aggregates from CDW: The C2CA Project, nternational Conference on Solid Waste Technology and Management. Philadelphia (USA), 2012.
A. Folch, Córdoba, G., Delgado-Granadox, H., García-Reynoso, A., Muñoz, A., Parra, R., Salmuni, G., and Viramonte, J., CENIZA: A Latino-American Network for Modelling and Monitoring Volcanic Ash and Aerosols and its Impact on Infrastructures and Air Quality. Cities on Volcanoes 6, Tenerife, 2010.
X. Rubio-Campillo, Matías, P. Valdés, and Ble, E., Centurions in the Roman Legion: Computer Simulation and Complex Systems, Journal of Interdisciplinary History, vol. 46. MIT Press, pp. 245–263, 2015.
M. Gonçalves, Jiménez-Guerrero, P., and Baldasano, J. M., The challenge of improving urban air quality: effects of hybrid cars, introduction in Barcelona and Madrid (Spain), International Journal of Environment and Pollution, vol. 47, no. 1/2/3/4. Inderscience Publishers, Switzerland, pp. 70-78, 2011.
H. Calmet, Gambaruto, A., Houzeaux, G., and Bates, A., Challenge of visualising large airway flows and particle transport, The 5th International Conference on Computational Methods (ICCM2014). Cambridge (UK), 2014.
M. Orozco, Challenges in molecular dynamics of macromolecules. EMBO Course on Molecular Modeling, 2010.
J. Garcia, Challis, C., Gallart, D., Garzotti, L., Görler, T., and Mantsinen, M. J., Challenges in the extrapolation from DD to DT plasmas: experimental analysis and theory based predictions for JET-DT, Plasma Physics and Controlled Fusion. Institute of Physics, 2016.
G. P. Gobbi, Angelini, F., Barnaba, F., Costabile, F., Baldasano, J. M., Basart, S., Sozzi, R., and Bolignano, A., Changes in particulate matter physical properties during Saharan advections over Rome (Italy): a four-year study, 2001–2004, Atmospheric Chemistry and Physics Discussions, vol. 13. Copernicus Publications, Germany, pp. 4963–4988, 2013.
G. P. Gobbi, Angelini, F., Barnaba, F., Costabile, F., Baldasano, J. M., Basart, S., Sozzi, R., and Bolignano, A., Changes in particulate matter physical properties during Saharan advections over Rome (Italy): a four-year study, 2001–2004, Atmospheric Chemistry and Physics, vol. 13, no. August. COPERNICUS GESELLSCHAFT MBH, GERMANY, pp. 7395–7404, 2013.
G. Houzeaux, Owen, H., Eguzkitza, B., Samaniego, C., de la Cruz, R., Calmet, H., Vázquez, M., and Avila, M., Chapter 8: A Parallel Incompressible Navier-Stokes Solver: Implementation Issues, in Developments in Parallel, Distributed, Grid and Cloud Computing for Engineering, vol. 31, Saxe-Coburg Publications, 2013, pp. Pages 171-201.
I. Ratković, Bežanić, N., Unsal, O. S., Cristal, A., and Milutinović, V., Chapter One – An Overview of Architecture-Level Power- and Energy-Efficient Design Techniques , Advances in Computers, vol. 98. Elsevier, pp. 1-57, 2015.
C. Pérez, Nickovic, S., Sicard, M., Rocadenbosch, F., Toledano, C., Cachorro, V. E., and Baldasano, J. M., Characterisation of Saharan dust events over the Iberian Peninsula: LIDAR, sun photometer and DREAM model simulations. European Geosciences Union Conference, 2005.
O. C. Zienkiewicz, Nithiarasu, P., Codina, R., Vázquez, M., and Ortiz., P., The characteristic - based - split procedure: an efficient and accurate algorithm for fluid problems. Int. J. Num. Meth. Fluids, 1999.
P. Jiménez-Guerrero, García-Vivanco, M., Jorba, O., Palomino, I., Pérez, C., Martín, F., and Baldasano, J. M., Characterization and Origin of Ozone and Particulate Matter in the Iberian Peninsula by the Application of Air Quality Modelling and Trajectory Clustering Correlation Methodologies. 2nd ACCENT Symposium, Urbino (Italy), 2007.
A. Madadkar-Sobhani, Characterization of adenosine receptor in its native environment: insights from molecular dynamics simulations of palmitoylated/glycosylated, membrane-integrated human A(2B) adenosine receptor., Journal of molecular modeling. 2012.
A. Gkikas, Hatzianastassiou, N., Mihalopoulos, N., and Torres, O., Characterization of aerosol episodes in the greater Mediterranean Sea area from satellite observations, Atmospheric Environment, vol. 128, no. March 2016. ELSEVIER, pp. 286–304, 2015.
C. Ferrer-Costa, Orozco, M., and de la Cruz, X., Characterization of compensates mutations in terms of structural and physico-chemical properties. J.Mol.Biol, 2006.
O. Jorba, Jiménez-Guerrero, P., Pérez, C., Mussons, P., and Baldasano, J. M., Characterization of ozone and particulate matter levels in a coastal urban site with the application of a trajectory clustering correlation methodology. 10th International Conference on Harmonisation within Atmospheric Dispersion Modelling for Regulatory Purposes, 2005.
O. Jorba, Jiménez-Guerrero, P., Pérez, C., and Baldasano, J. M., Characterization of Ozone and Particulate Matter levels in a Coastal site with the aplication of a Trajectory Clustering Correlation Methodology. 10th Int. Conf. On Harmonisation within Atmospheric Dispersión Modeling for Regulatoty Purposes, 2005.
M. Barbany, Morata, J., Meyer, T., Lois, S., Orozco, M., and de la Cruz, X., Characterization of the impact of alternative splicing on protein dynamics: the cases of glutathione S-transferase and ectodysplasin-A isoforms., Proteins, vol. 80, no. 9. pp. 2235-49, 2012.
N. Poggi, Carrera, D., Gavaldà, R., Torres, J., and Ayguadé, E., Characterization of Workload and Resource Consumption for an Online Travel and Booking Site. 2010 IEEE International Symposium on Workload Characterization (IISWC-2010), 2010.
R. Agius, Torchala, M., Moal, I. H., Fernández-Recio, J., and Bates, P. A., Characterizing changes in the rate of protein-protein dissociation upon interface mutation using hotspot energy and organization., PLoS computational biology, vol. 9, no. 9. p. e1003216, 2013.
Í. Goiri, Guitart, J., and Torres, J., Characterizing Cloud Federation for Enhancing Providers' Profit, 3rd IEEE International Conference on Cloud Computing (CLOUD'10). Miami, Florida, USA, pp. 123-130, 2010.
J. Espinosa, Hernandez, C., and Abella, J., Characterizing Fault Propagation in Safety-Critical Processor Designs, 21st IEEE International On-Line Testing Symposium (IOLTS), Elia, Halkidiki, Greece. pp. 144-149, 2015.
V. Jimenez, Cazorla, F., Gioiosa, R., Valero, M., Boneti, C., Kursun, E., Cher, C., Isci, C., Buyuktosunoglu, A., and Bose, P., Characterizing Power and Temperature Behavior of POWER6-Based System, IEEE Journal of Emerging and Selected Topics in Circuits and Systems. 2011.
J. Guitart, Beltran, V., Carrera, D., Torres, J., and Ayguadé, E., Characterizing Secure Dynamic Web Applications Scalability, 19th IEEE International Parallel and Distributed Processing Symposium (IPDPS'05). Denver, Colorado, USA, 2005.
P. Fuentes, Bosque, J. Luis, Beivide, R., and Valero, M., Characterizing the Communication Demands of the Graph500 Benchmark on a Commodity Cluster, IEEE/ACM International Symposium on Big Data Computing. 2014.
P. Fuentes, Bosque, J. L., Beivide, R., Valero, M., and Minkenberg, C., Characterizing the Communication Demands of the Graph500 Benchmark on a Commodity Cluster, International Symposium on Big Data Computing (BDC 2014). IEEE/ACM, London, UK, 2014.
V. Cakarevic, Radojkovic, P., Verdú, J., Pajuelo, A., Cazorla, F., Nemirovsky, M., and Valero, M., Characterizing the resource-sharing levels in the UltraSPARC T2 Processor. In 42nd Annual IEEE/ACM International Symposium on Microarchitecture (MICRO), New York, USA, 2009.
S. Manousopoulos, Moretó, M., Gioiosa, R., Koziris, N., and Cazorla, F., Characterizing Thread Placement in the IBM POWER7 Processor, IEEE International Symposium on Workload Characterization (IISWC-2013). IEEE, San Diego, United States, pp. 1–11, 2012.
S. Basart, Nabat, P., Dulac, F., Mallet, M., Baldasano, J. M., Laurent, B., Menut, L., L. Amraoui, E., Chaboureau, J. - P., Léon, J. F., Somon, F., Sic, B., Schepanski, K., and Bouffiès-Cloché, S., ChArMEx dust model intercomparison over summer 2012: preliminary results. Dust Models Intercomp Workshop, Toulouse, 27 March, 2014.
S. Basart, Dulac, F., Baldasano, J. M., Nabat, P., Mallet, M., Roblou, L., Solmon, F., Laurent, B., Vincent, J., Menut, L., Siour, G., L. Amraoui, E., Sic, B., Chaboureau, J. - P., Léon, J. - F., Schepanski, K., J.-B.Renard, Ravetta, F., Pelon, J., Biagio, D. C., Formenti, P., Chiapello, I., Roujean, J. - L., Ceamanos, X., Carrer, D., Sicard, M., Delbarre, H., Bouffiès-Cloché, S., and Attié, J. - L., ChArMEx dust model intercomparison over summer 2012:preliminary results, 4th International Workshop CHArMEx-the Chemistry-Aerosol Mediterranean Experiment . 4th International Workshop CHArMEx-the Chemistry-Aerosol Mediterranean Experiment, Trieste (Italy) October 20-24 , 2014.
M. Macías and Guitart, J., Cheat-proof Trust Model for Cloud Computing Markets, Lecture Notes on Computer Science (LNCS), 9th International Conference on Economics of Grids, Clouds, Systems, and Services (GECON'12), vol. 7714. Berlin, Germany, pp. 154-168, 2012.
Í. Goiri, Julià, F., Guitart, J., and Torres, J., Checkpoint-based Fault-tolerant Infrastructure for Virtualized Service Providers, 12th IEEE/IFIP Network Operations and Management Symposium (NOMS'10). Osaka, Japan, pp. 455-462, 2010.
M. T. Pay, Piot, M., Jiménez-Guerrero, P., Jorba, O., Pérez, C., Baldasano, J. M., Querol, X., Pandolfi, M., and Alastuey, A., Chemical composition of particulate matter from a high-resolution Air Quality Modelling System over Spain. AAAR09, 28th Annual Conference, Minneapolis (Minnesota, USA), 2009.
M. T. Pay, Pay, M. T., Piot, M., Jorba, O., Basart, S., Gassó, S., Dabdub, D., Jiménez-Guerrero, P., and Baldasano, J. M., Chemical Composition of Particulate Matter in Spain: Modeling Evaluation of the CALIOPE System for 2004. Geophysical Research Abstracts, Vol. 12, EGU2010-5279. Viena, 2010.
G. Houzeaux and Codina, R., A Chimera method based on a Dirichlet/Neumann(Robin) coupling for the Navier-Stokes equations. Comp. Meth. Appl. Mech. Eng., 2003.
G. Houzeaux, Eguzkitza, B., Aubry, R., Owen, H., and Vázquez, M., A Chimera method for the incompressible Navier–Stokes equations, International Journal for Numerical Methods in Fluids, vol. 75, no. 3. pp. 155-183, 2014.
M. Vázquez, Houzeaux, G., and Codina, R., Chimera type domain decomposition methods applied to fractional step finite element. Barcelona (Spain)., 2000.
E. Vallejo, Galluzzi, M., Cristal, A., Vallejo, F., Beivide, R., Stenström, P., Smith, J. E., and Valero, M., Chip Multiprocessors with Implicit Transactions, 2006 Advanced Computer Architecture and Compilation for Embedded Systems (ACACES-06). Academia Press, L'Aquila, Italy, pp. 167–170, 2006.
F. Artigas, Marti, A., Yao, N., and Pechmann, I., Chlorophyll Detection and Mapping of Shallow Water Impoundments Using Image Spectrometry, Research Letters in Ecology, vol. 2008. 2008.

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