Publications

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Author Title Type [ Year(Asc)]
2011
J. L. Gelpí, Infraestructura de Web Services y Supercomputación, Tutoriales Formativos en Biomedicina Computacional. : Lestrove (Coruña) (ESPANYA). 2011.
O. Fitó and Guitart, J., Initial Thoughts on Business-driven IT Management Challenges in Cloud Computing Providers, 6th IFIP/IEEE International Workshop on Business Driven IT Management (BDIM'11) (Short Paper). Dublin, Ireland, pp. 1066-1069, 2011.
V. Gajinov, Cristal, A., Milovanovic, M., Ayguadé, E., Unsal, O., and Valero, M., Integrating dataflow abstractions into transactional memory, Systems for Future Multi-Core Architectures (SFMA'11) . 2011.
V. Gajinov, Milovanovic, M., Unsal, O., Cristal, A., Ayguadé, E., and Valero, M., Integrating Dataflow Abstractions into Transactional Memory, First Workshop on Systems for Future Multi-Core Architectures (SFMA'11). Salzburg, Austria, pp. 1–6, 2011.
Í. Goiri, Le, K., Guitart, J., Torres, J., and Bianchini, R., Intelligent Placement of Datacenters for Internet Services, 31th International Conference on Distributed Computing Systems (ICDCS'11). Minneapolis, MN, USA, pp. 131-142, 2011.
G. Kestor, Dalessandro, L., Cristal, A., Scott, M. L., and Unsal, O., Interchangeable Back Ends for STM Compilers, 6th ACM SIGPLAN Workshop on Transactional Computing (TRANSACT). San Jose Convention Center, United States, 2011.
L. Valentova, Gallovic, F., and de la Puente, J., Inversion of Love wave traveltimes in Czech Republic using adjoint method, Geophysical Research Abstracts. EGU, pp. EGU2011-6858, 2011.
J. Strassburg and Alexandrov, V., Investigating Scaling Behavior of Monte Carlo Codes for Dense Matrix Inversion, Supercomputing 2011, ScalA Workshop, ACM Companion Volume Proceedings. ACM, pp. 33-36, 2011.
J. Ejarque, Micsik, A., Sirvent, R., Pallinger, P., Kovacs, L., and Badia, R. M., Job Scheduling with License Reservation: A Semantic Approach, 19th Euromicro International Conference on Parallel, Distributed and Network-Based Processing (PDP), 2011 . IEEE, pp. 47–54, 2011.
P. Lafortune, Aris, R., Vázquez, M., Houzeaux, G., and Jerusalem, A., Large Scale Electro Mechanical cardiac Simulations, 2st International Conference on Mathematical and Computational Biomedical Engineering. Washington D.C. (USA), 2011.
P. Lafortune, Aris, R., Vázquez, M., Houzeaux, G., and Jerusalem, A., Large Scale Electro Mechanical cardiac Simulations, 2nd International Conference on Mathematical and Computational Biomedical Engineering. Washington D.C. (USA), 2011.
M. Álvarez, Bofill, P., Sánchez, F., and Farreras, M., Learning the Principles of Parallel Computing with Games, Active Learning in Engineering Education Workshop 2011. 2011.
N. Rajovic, Puzovic, N., Vilanova, L., Villavieja, C., and Ramirez, A., The low-power Architecture Approach Towards Exascale Computing, Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems (ScalA). 2011.
L. Helft, Reddy, V., Chen, X., Koller, T., Federici, L., Fernández-Recio, J., Gupta, R., and Bent, A., LRR conservation mapping to predict functional sites within protein leucine-rich repeat domains., PloS one, vol. 6, no. 7. p. e21614, 2011.
P. Bellens, Pérez, J. M., Badia, R. M., and Labarta, J., Making the Best of Temporal Locality: Just-in-Time Renaming and Lazy Write-Back on the Cell/B.E., International Journal of High Performance Computing Applications, vol. 25, no. 2. 2011.
M. Pavlovic, Etsion, Y., and Ramirez, A., On the Memory System Requirements of Future Scientific Applications: Four Case Studies., 2011 IEEE International Symposium on Workload Characterization. pp. 159-170, 2011.
R. Ferrer, Royuela, S., Caballero, D., Duran, A., Martorell, X., and Ayguadé, E., Mercurium: Design Decisions for a S2S Compiler, Cetus Users and Compiler Infastructure Workshop in conjunction with PACT 2011. 2011.
P. Dadvand, Rossi, R., Gil, M., Martorell, X., Juanpere, E., Ildelsohn, S. R., and Oñate, E., Migration of a Generic Multi-Physics Framework to HPC Environments, 23rd International Conference on Parallel Computational Fluid Dynamics. 2011.
F. Wallrap, Mixed Quantum and classical simulation techniques for zapping eletron transfer in proteins, 2011.
K. Haustein, Pérez, C., Jorba, O., Baldasano, J. M., Janjic, Z., Black, T., Nickovic, S., Washington, R., Todd, M. C., and Govaerts, Y., A model for prediction of mineral dust from meso to global scales: Regional experiments for North Africa, 8th European Geosciences Union Conference (EGU) General Assembly. Geophysical Research Abstracts, vol. 13. European Geosciences Union (EGU), 3-8 April, 2011. Viena, Austria, 2011.
J. M. Baldasano, Pay, M. T., Mailler, S., Jiménez-Guerrero, P., and Gassó, S., Model inter-comparison of CMAQ and CHIMERE in the framework of CALIOPE air quality project, 10th Annual CMAS Conference. US-EPA/CMAS, October 24-26, 2011 Chapel Hill, NC (USA), 2011.
J. L. Gelpí, MoDEL. Molecular Dynamics Extended Library, nDDB Meeting - Grenoble - France. nDDB Meeting - Grenoble - France, 2011.
J. M. Baldasano, Modelización de la calidad del aire: Sistema CALIOPE, Seminário Ibérico da Qualidade do Ar. Agência Portuguesa do Ambiente (APA) and Ministerio de Medio Ambiente, y Medio Rural y Marino (MARM), 28 June 2011. Lisbon, Portugal, 2011.
A. Hernández-Ortega, Lucas, F., Ferreira, P., Medina, M., Guallar, V., and Martínez, A. T., Modulating O2 reactivity in a fungal flavoenzyme: involvement of aryl-alcohol oxidase Phe-501 contiguous to catalytic histidine., The Journal of biological chemistry, vol. 286, no. 47. pp. 41105-14, 2011.
L. Kowalczyk, Ratera, M., Paladino, A., Bartoccioni, P., Errasti-Murugarren, E., Valencia, E., Portella, G., Bial, S., Zorzano, A., Fita, I., Orozco, M., Carpena, X., Vázquez-Ibar, J. L., and Palacín, M., Molecular basis of substrate-induced permeation by an amino acid antiporter., Proceedings of the National Academy of Sciences of the United States of America, vol. 108, no. 10. pp. 3935-40, 2011.
J. Strassburg, Alexandrov, V., and Martel, G. C., Monte Carlo Scalable Algorithms for Computational Finance, Procedia Computer Science, vol. 4. Elsevier, pp. 1708-1715, 2011.
A. Fries, Portell, J., Isasi, Y., Castañeda, J., Sirvent, R., and Taboada, G. L., MPI-based Solution for Efficient Data Access in Java HPC, INFOCOMP 2011, The First International Conference on Advanced Communications and Computation. pp. 149–154, 2011.
Í. Goiri, Guitart, J., and Torres, J., Multifaceted Resource Management on Virtualized Providers, 2011.
A. Schiller, Sutmann, G., Martinell, L., Bellens, P., and Badia, R. M., Multiparticle Collision Dynamics on the Cell Broadband Engine using CellSs, Proc. of the Second International Conference on Parallel, Distributed, Grid and Cloud Computing for Engineering. 2011.
A. N. Naganathan and Orozco, M., The native ensemble and folding of a protein molten-globule: functional consequence of downhill folding., Journal of the American Chemical Society, vol. 133, no. 31. pp. 12154-61, 2011.
B. P. Cossins, Jacobson, M. P., and Guallar, V., A new view of the bacterial cytosol environment., PLoS computational biology, vol. 7, no. 6. p. e1002066, 2011.
O. Jorba, Pérez, C., Haustein, K., Janjic, Z., Baldasano, J. M., Dabdub, D., Badia, A., and Spada, M., The NMMB/BSC-CHEM online chemical weather prediction system: current status of development and feedback interactions, 8th European Geosciences Union Conference (EGU) General Assembly. Geophysical Research Abstracts, vol. 13. European Geosciences Union (EGU), 3-8 April, 2011. Viena, Austria, 2011.
O. Jorba, Pérez, C., Haustein, K., Janjic, Z., Baldasano, J. M., Dabdub, D., Badia, A., and Spada, M., The NMMB/BSC-CTM: a multiscale online chemical weather prediction system, 14th Conference on Harmonisation within Atmospheric Dispersion Modelling for Regulatory Purposes (HARMO 14), vol. 1. Environmental Technology Laboratory, Department of Mechanical Engineering, University of West Macedonia, Greece, Kos Island, Greece, pp. 345-349, 2011.
N. Poggi, Carrera, D., Gavaldà, R., and Ayguadé, E., Non-intrusive Estimation of QoS Degradation Impact on E-commerce User Satisfaction, Network Computing and Applications (NCA), 2011 10th IEEE International Symposium on. IEEE, pp. 179–186, 2011.
J. M. Baldasano, Noves Evidèncias sobre el Canvi Climàtic, Aula de Humanidades. Hospital del valle Hebrón, 24 May 2011. Barcelona, Spain, 2011.
F. Raimondi, Portella, G., Orozco, M., and Fanelli, F., Nucleotide binding switches the information flow in ras GTPases., PLoS computational biology, vol. 7, no. 3. p. e1001098, 2011.
F. Raimondi, Portella, G., Orozco, M., and Fanelli, F., Nucleotide switches the information flow in Ras GTPases. In Press, 2011.
O. Flores and Orozco, M., nucleR: a package for non-parametric nucleosome positioning., Bioinformatics (Oxford, England), vol. 27, no. 15. pp. 2149-50, 2011.
D. J. Doorly, Houzeaux, G., Taylor, D. J., Calmet, H., and Vázquez, M., Numerical simulation of air flow in the large airways, Submitted to Computers & Fluids. 2011.
H. Talebi, Samaniego, C., Samaniego, E., and Rabczuk, T., On the numerical stability and mass-lumping schemes for explicit enriched meshfree methods, IJNME. 2011.
N. Markovic, Nemirovsky, D., González, R., Unsal, O., Valero, M., and Cristal, A., Object Oriented execution Model (OOM), New Directions in Computer Architecture (NDCA-2). San Jose, California, United States, 2011.
N. Markovic, Nemirovsky, D., González, R., Ünsal, O. S., Valero, M., and Cristal, A., Object Orienteed Execution Model (OOM), 2nd Workshop on New Directions in Computer Architecture (NDCA-2) Held in Conjunction with the 38th International Symposium on Computer Architecture (ISCA-38). San Jose, California, Sunday June 5th, 2011.
A. Duran, Ayguadé, E., Badia, R. M., Labarta, J., Martinell, L., Martorell, X., and Planas, J., OmpSs: A PROPOSAL FOR PROGRAMMING HETEROGENEOUS MULTI-CORE ARCHITECTURES, Parallel Processing Letters, vol. 21, no. 2. pp. 173-193, 2011.
O. Jorba, Pérez, C., Haustein, K., Janjic, Z., Baldasano, J. M., Dabdub, D., Badia, A., and Spada, M., Online air quality developments undertaken within the NMMB multiscale model at the Barcelona Supercomputing Center, 3rd International Workshop on Air Quality Forecasting Research (IWAQFR), vol. . Air Resources Laboratory of NOAA, November 29 - December 1, 2011, Bolger Center, Potomac, MD, 2011.
Q. Liu, Moretó, M., Abella, J., and Cazorla, F., Online Performance Prediction in Processors with DVFS Capabilities, ACACES 2011. Poster Abstracts. Advanced Computer Architecture and Compilation for Embedded Systems. 2011.
M. Hanzich, Hernández, P., Giné, F., Solsona, F., and Lérida, J. L., On/Off-Line Prediction Applied to Job Scheduling on Non-Dedicated NOWs, Journal of Computer Science and Technology, vol. 26 (1). pp. 99-116, 2011.
J. Alonso, Goiri, Í., Guitart, J., Gavaldà, R., and Torres, J., Optimal Resource Allocation in a Virtualized Software Aging Platform with Software Rejuvenation, 22th IEEE International Symposium on Software Reliability Engineering (ISSRE'11). Hiroshima, Japan, pp. 250-259, 2011.
R. Ferrer, Planas, J., Bellens, P., Duran, A., González, M., Martorell, X., Badia, R. M., Ayguadé, E., and Labarta, J., Optimizing the Exploitation of Multicore Processors and GPUs with OpenMP and OpenCL, Lecture Notes in Computer Science, vol. 6548/2011. Springer-Verlag Berlin Heidelberg, pp. 215-229, 2011.
J. Ejarque, Álvarez, J., Sirvent, R., and Badia, R. M., Orchestrating Services on a Public and Private Cloud Federation, 5th Iberian Gird Infrastructure Conference Proceedings. pp. 61-72, 2011.
F. Rubio, Hanzich, M., Aris, R., Vázquez, M., and Houzeaux, G., Parallel Computational Electrophysiology in NVIDIA GPUs, 2st International Conference on Mathematical and Computational Biomedical Engineering. Washington D.C. (USA), 2011.

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