Publications

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Computer Sciences 2010 Publications

Journals

  • Alberto Sánchez, María S. Pérez, Jesús Montes, Toni Cortes, "A high performance suite of data services for grids". Future Generation Computer Systems, 1/4/2010
  • Alex Ramirez, Felipe Cabarcas, Ben Juurlink, Mauricio Alvarez Mesa, Friman Sanchez, Arnaldo Azevedo,Cor Meenderinck,Catalin Ciobanu, Sebastian Isaza,Georgi Gaydadjiev, ""The SARC Architecture"". IEEE Micro, vol. 30, no. 5, pp. 16-29, 1/9/2010
  • Andras Micsik, Jorge Ejarque, Rosa M. Badia, "A Semantic Toolkit for Scheduling in Cloud and Grid Platforms". ERCIM News 83, 14/10/2010
  • Eduard Ayguade, Rosa M. Badia, Pieter Bellens, Daniel Cabrera, Alejandro Duran, Marc Gonzalez, Francisco Igual, Daniel Jimenez-Gonzalez, Jesus Labarta, Luis Martinell, Xavier Martorell, Rafael Mayo, Jose M. Perez, Judit Planas and Enrique S. Quintana-Ortí, "Extending OpenMP to Survive the Heterogeneous Multi-core Era". International Journal of Parallel Programming, vol. 38, nos: 5-6, pages: 440-459, 1/6/2010
  • Harm Munk, Eduard Ayguade, Cedric Bastoul, Paul Carpenter, Zbigniew Chamski, Albert Cohen, Marco Cornero, Philippe Dumont, Marc Duranton, Mohammed Fellahi, Roger Ferrer, Razya Ladelsky, Menno Lindwer, Xavier Martorell, Cupertino Miranda, Dorit Nuzman, Andrea Orstein, Antoniu Pop, Sebastian Pop, Louis-Noel Pouchet, Alex Ramirez, David Rodenas, Erven Rohou, Ira Rosen, Uzi Shvadron, Konrad Trifunovic and Ayal Zaks, "ACOTES Project: Advanced Compiler Technologies for Embedded Streaming Harm Munk". International Journal of Parallel Programming, pp. 1-54, 20/4/2010
  • Hatem Ltaief, Jakub Kurzak, Jack Dongarra, Rosa M. Badia, "Scheduling Two-sided Transformations using Tile Algorithms on Multicore Architectures". Scientific Programming, vol 18(1), pages 35-50, 1/1/2010
  • Isaac Gelado, John E. Stone, Javier Cabezas, Sanjay Patel, Nacho Navarro, Wen-mei W. Hwu, "An Asymmetric Distributed Shared Memory Model for Heterogeneous Parallel Systems". ACM SIGARCH Computer Architecture News - ASPLOS '10, 13/3/2010
  • J. Ejarque, M. de Palol, I. Goiri, F. Julià, J. Guitart, R. Badia, and J. Torres, "Exploiting Semantics and Virtualization for SLA-driven Resource Allocation in Service Providers". Concurrency and Computation: Practice and Experience, Vol. 22 (5), pp. 541-572, 1/4/2010
  • J. Guitart, J. Torres, and E. Ayguadé, "A Survey on Performance Management for Internet Applications". Concurrency and Computation: Practice and Experience, Vol. 22 (1), pp. 68-106, 1/1/2010
  • Jakub Kurzak, Hatem Ltaief, Jack Dongarra, Rosa M. Badia, "Scheduling dense linear algebra operations on multicore processors". Concurrency and Computation: Practice and Experience, volume 22, issue 1, 1/1/2010
  • Jesus Labarta, "MareIncognito: A Perspective towards Exascale". Facing the Multicore-Challenge: Aspects of new Paradigms and Technologies in Parallel Computing. LNCS6310., 18/3/2010
  • Jose María Cámara, Miquel Moretó, Enrique Vallejo, Ramón Beivide, Carmen Martínez, Jose Miguel-Alonso and Javier Navaridas, "Twisted Torus Topologies for Enhanced Interconnection Networks". IEEE Transactions on Parallel and Distributed Systems, 1/12/2010
  • M. Macías, O. Rana, G. Smith, J. Guitart, and J. Torres, "Maximizing Revenue in Grid Markets using an Economically Enhanced Resource Manager". Concurrency and Computation: Practice and Experience, Vol. 22 (14), pp. 1990-2011, 1/9/2010
  • Maja Etinski, Julita Corbalan, Jesus Labarta, Mateo Valero, "Utilization Driven Power-Aware Job Scheduling". Computer Science - Research and Development, Volume 25, Number 3-4, 1/9/2010
  • Marc Casas-Guix, Rosa M. Badia, Jesus Labarta, "Automatic Phase Detection and Structure Extraction of MPI Applications". International Journal of High Performance Computing Applications, Vol. 24, Number 3, pp. 335-360, 1/8/2010
  • Mateo Valero and Nacho Navarro, "Multicore, the View from Europe". IEEE Micro Journal (special issue editors), 1/9/2010
  • Matthias Muller and Eduard Ayguade, "Guest Editors' Introduction". International Journal of Parallel Programming (Special issue on OpenMPI), vol. 38, no. 5, pp. 339-340, 1/10/2010
  • Miquel Moretó, Francisco J. Cazorla, Alex Ramirez, Rizos Sakellariou and Mateo Valero, "FlexDCP: a QoS framework for CMP architectures". ACM Operating Systems Review, pp. 86-96, vol. 43, no. 2. Special Issue on the Interaction among the OS, Compilers, and Multicore Processors, 30/4/2010
  • Nikola Vujic, Felipe Cabarcas, Marc Gonzalez, Xavier Martorell, Alejandro Ramirez, Eduard Ayguade, "DMA++: On the Fly Data Realignment for On-Chip Memories". IEEE transactions on computers, 9/12/2010
  • Nikola Vujic, Marc Gonzàlez, Xavier Martorell, Eduard Ayguade, "Automatic Prefetch and Modulo Scheduling Transformations for the Cell BE Architecture". IEEE Transactions on Parallel and Distributed Systems, vol 21(4), pp.494-505, 15/4/2010
  • Ramon Bertran, Marc Gonzalez, Xavier Martorell, Nacho Navarro, Eduard Ayguade, "Local Memory Design Space Exploration for High-Performance Computing". The Computer Journal, vol. 53(3), 23/3/2010
  • Roger Ferrer, Pieter Bellens, Jae-Seung Yeom, Scott Schneider, Konstantinos Koukos, Michail Alvanos, Vicenç Beltran, Marc González, Xavier Martorell, Rosa M. Badia, Dimitrios S. Nikolopoulos, Angelos Bilas, Eduard Ayguadé, "Parallel Programming Models for Heterogeneous Multicore Architectures". IEEE Micro, vol. 30, no. 5, 1/9/2010
  • S. Reyes, C. Muñoz-Caro, A. Niño, R. Sirvent, R.M. Badia, "Monitoring and Steering Grid Applications with GRID superscalar". Future Generation Computer Systems, vol. 26 (4), pp. 645-653, 1/4/2010
  • Schwiegelshohn, U.; Badia, R.M.; Bubak, M.; Danelutto, M.; Dustdar, S.; Gagliardi, F.; Geiger, A.; Hluchy, L.; Kranzlmuller, D.; Laure, E.; Priol, T.; Reinefeld, A.; Resch, M.; Reuter, A.; Rienhoff, O.; Ruter, T.; Sloot, P.; Talia, D.; Ullmann, K.; Yahyap, "Perspectives on grid computing". Future Generation Computer Systems, Volume 26, Issue 8, October 2010, Pages 1104-1115, 1/10/2010
  • Yehuda Afek, Ulrich Drepper, Pascal Felber, Christof Fetzer, Vincent Gramoli, Michael Hohmuth, Etienne Riviere, Per Stenström, Osman S. Unsal, Walther Maldonado, Derin Harmanci, Patrick Marlier, Stephan Diestelhorst, Martin Pohlack, Adrián Cristal, Ibrahim Hur, Aleksandar Dragojevic, Rachid Guerraoui, Michal Kapalka, Sasa Tomic, Guy Korland, Nir Shavit, Martin Nowack, Torvald Riegel, "The Velox Transactional Memory Stack". IEEE Micro 30(5): 76-87, 1/9/2010

Book Chapters

  • Carlos Boneti, Roberto Gioiosa, Francisco J. Cazorla and Mateo Valero, "Using hardware resource allocation to balance HPC applications, Parallel and Distributed Computing". Parallel and Distributed Computing, 1/1/2010
  • Cecilia Gonzalez, Harald Servat, Daniel Cabrera, Xavier Aguilar, Carles Pons, Juan Fernandez and Daniel Jimenez, "Drug Design on the Cell BE". Scientific Computing with Multicore and Accelerators, pp 331-346, 23/12/2010
  • Jesus Labarta, "New Analysis Tecniques in the CEPBA-Tools Environment". in Tools for High Performance Computing 2009. Springer. ISBN 978-3-642-11260-7, 1/1/2010
  • Mateo Valero, "Computadores de Altas Prestaciones". Memorias de la Real Academia de Ciencias y Artes de Barcelona. Vol. LXIV, no. 6, pp. 247-315., 1/1/2010

International Conferences

  • Josep M Perez, Rosa M. Badia and Jesus Labarta, "Handling task dependencies under strided and aliased references". Proceedings of the 24th ACM International Conference on Supercomputing, 4/6/2010
  • Aislan G Foina, Rosa M Badia and Javier Ramirez-Fernandez, "G-means Improved for Cell BE Environment". Facing the Multicore-Challenge, 17/3/2010
  • Aislan G. Foina, Javier Ramirez-Fernandez, and Rosa M. Badia, "Cell BE and Bluetooth applied to Digital TV". proceedings of 12th IEEE/IFIP Network Operations and Management Symposium (NOMS 2010), 19/4/2010
  • Aislan Gomide Foina, Francisco Javier Ramirez-Fernandez, Ahmed El-Deeb, Rosa M Badia, "Player Tracker - A Tool to Analyze Sport Players using RFID". proceedings of 8th IEEE International Conference on Pervasive Computing and Communications PerCom 2010, 29/3/2010
  • Alejandro Rico, Jeff H. Derby, Robert K. Montoye, Timothy H. Heil, Chen-Yong Cher, Pradip Bose, ""Performance and Power Evaluation of an In-line Accelerator"". Proceedings of the 2010 ACM International Conference on Computing Frontiers, 1/5/2010
  • Alessandro Cilardo, Luigi Esposito, Antonio Veniero, Antonino Mazzeo, Vicenç Beltran and Eduard Ayguadé, "A CellBE-based HPC Application for the Analysis of Vulnerabilities in Cryptographic Hash Functions". Melbourne, Australia, 1/9/2010
  • Alessandro Morari, Francesco Piermaria, Emiliano Betti, Roberto Gioiosa, Marco Cesati, "Analyzing OS noise for HPC systems". The 6th ACACES 2010 (Advanced Computer Architecture and Compilation for High-Performance and Embedded Systems), 12/7/2010
  • Alvaro Martínez, Santiago Prieto, Noé Gallego, Ramon Nou, Jacobo Giralt, Toni Cortes, "XtreemOS-MD: Grid computing from mobile devices". Mobilware 2010, 30/6/2010
  • Bhavishya Goel, Sally A. McKee, Roberto Gioiosa, Karan Singh, Major Bhadauria and Marco Cesati, "Portable, Scalable, per-Core Power Estimation for Intelligent Resource Management". Green Computing Conference, 2010 International, 16/8/2010
  • Enric Tejedor, Rosa M. Badia, Romina Royo and Josep L. Gelpí, "Enabling HMMER for the Grid with COMP Superscalar". Proceedings of the International Conference on Computational Science 2010, 31/5/2010
  • Enrique Vallejo, Ramón Beivide, Adrián Cristal, Tim Harris, Fernando Vallejo, Osman Unsal, Mateo Valero, "Architectural support for Fair Reader-Writer Locking". 43rd International Symposium on Microarchitecture (Micro-43), 18/12/2010
  • Ernest Artiaga and Toni Cortes, "Using File System Virtualization to Avoid Metadata Bottlenecks". Design, Automation and Test in Europe (DATE 2010), 8/3/2010
  • Felipe Cabarcas, Alejandro Rico, Yoav Etsion, Alex Ramirez, "Interleaving Granularity on High Bandwidth Memory Architecture for CMPs". In Intl. Conf. on Embedded Computer Systems: Architectures, Modeling, and Simulation (SAMOS), 2/7/2010
  • Ferad Zyulkyarov, Srdjan Stipic, Tim Harris, Osman Unsal, Adrián Cristal, Ibrahim Hur, Mateo Valero, "Discovering and Understanding Performance Bottlenecks in Transactional Applications". 19th International Conference on Parallel Architectures and Compilation Techniques PACT2010, 18/9/2010
  • Ferad Zyulkyarov, Tim Harris, Adrian Cristal, Osman S. Unsal, Mateo Valero, "Debugging Programs that use Atomic Blocks and Transactional Memory". 15th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming (PPoPP´10), 18/1/2010
  • Friman Sánchez, Felipe Cabarcas, Alex Ramirez, Mateo Valero, "Long DNA Sequence Comparison on Multicore Architectures". Proceedings of the 16th international Euro-Par conference on Parallel processing, 1/9/2010
  • G. Reig, J. Alonso, and J. Guitart, "Prediction of Job Resource Requirements for Deadline Schedulers to Manage High-Level SLAs on the Cloud". 9th IEEE International Symposium on Network Computing and Applications (NCA'10), Cambridge, Massachusetts, USA, pp. 162-167 (Short Paper), 15/7/2010
  • German Llort, Juan Gonzalez, Harald Servat, Judit Gimenez, and Jesus Labarta, "On-line Detection of Large-scale Parallel Application's Structure". 24th IEEE International Parallel and Distributed Processing Symposium (IPDPS'2010), 1/5/2010
  • I. Goiri, F. Julià, J. Guitart, and J. Torres, "Checkpoint-based Fault-tolerant Infrastructure for Virtualized Service Providers". 12th IEEE/IFIP Network Operations and Management Symposium (NOMS'10), Osaka, Japan, pp. 455-462, 19/4/2010
  • I. Goiri, F. Julià, R. Nou, J.L. Berral, J. Guitart, and J. Torres, "Energy-aware Scheduling in Virtualized Datacenters". 12th IEEE International Conference on Cluster Computing (Cluster'10), Heraklion, Crete, Greece, pp. 58-67, 20/9/2010
  • I. Goiri, J. Guitart, and J. Torres, "Characterizing Cloud Federation for Enhancing Providers' Profit". 3rd IEEE International Conference on Cloud Computing (CLOUD'10), Miami, Florida, USA, pp. 123-130, 5/7/2010
  • I. Goiri, J.O. Fitó, F. Julià, R. Nou, J.L. Berral, J. Guitart, and J. Torres, "Multifaceted Resource Management for Dealing with Heterogeneous Workloads in Virtualized Data Centers". 11th International Conference on Grid Computing (Grid'10), Brussels, Belgium, pp. 25-32, 25/10/2010
  • J. L. Gonzalez, Toni Cortes, Jaime Delgado-Meraz, Ana Piedad Rubio, "HRaidTools: An on-line Suite of Simulation Tools for Heterogeneous RAID systems". Third International Conference on Simulation Tools and Techniques (SIMUTools 2010), 15/3/2010
  • J.L. Berral, I. Goiri, R. Nou, F. Julià, J. Guitart, R. Gavaldà, and J. Torres, "Towards Energy-aware Scheduling in Data Centers using Machine Learning". 1st International Conference on Energy-Efficient Computing and Networking (e-Energy'10), University of Passau, Germany, pp. 215-224, 13/4/2010
  • J.O. Fitó, I. Goiri, and J. Guitart, "SLA-driven Elastic Cloud Hosting Provider". 18th Euromicro Conference on Parallel, Distributed and Network-based Processing (PDP'10), Pisa, Italy, pp. 111-118, 17/2/2010
  • J.O. Fitó, M. Macías, and J. Guitart, "Toward Business-driven Risk Management for Cloud Computing". 6th IEEE/IFIP International Conference on Network and Service Management (CNSM'10), Niagara Falls, Canada, pp. 238-241 (Short Paper), 25/10/2010
  • Javier Bueno, Xavier Martorell, Juan José Costa, Toni Cortés, Eduard Ayguadé, Guansong Zhang, Christopher Barton and Raul Silvera, "Reducing Data Access Latency in SDSM Systems using Runtime Optimizations". Proc. of the CAS Conference (CASCON '10), pp. 160-173, 1/11/2010
  • Javier Díaz., Sebastián Reyes, Rosa M. Badia, Alfonso Niño, Camelia Muñoz-Caro, "A General Model for the Generation and Scheduling of Parameter Sweep Experiments in Computational Grid Environments". proceedings of the International Conference on Computational Science 2010, ICCS2010, 31/5/2010
  • Jordà Polo, David Carrera, Yolanda Becerra, Jordi Torres, Eduard Ayguadé, Malgorzata Steinder, Ian Whalley, "Performance-Driven Task Co-Scheduling for MapReduce Environments". 2010 EEE/IFIP Network Operations and Management Symposium (NOMS2010), 19/4/2010
  • Jorge Ejarque, Andras Micsik, Raül Sirvent, Peter Pallinger, Laszlo Kovacs and Rosa M. Badia, "Semantic Resource Allocation with Historical Data Based Predictions". The First International Conference on Cloud Computing, GRIDs, and Virtualization, 23/11/2010
  • Jorge Ejarque, Enric Tejedor, Daniele Lezzi, Raül Sirvent, Rosa M. Badia, "Supporting Parallel Tasks with GRID superscalar". 4th Iberian Grid Infraestructure Conference, 27/5/2010
  • Jorge Ejarque, Raül Sirvent and Rosa M. Badia, "A Multi-Agent Approach for Semantic Resource Allocation". 2nd IEEE International Conference on Cloud Computing Technology and Sciene, 23/11/2010
  • Josep M. Perez, "An overview of StarSs". DEISA-TeraGrid Summer School,Catania, Italy, 26/10/2010
  • Juan Gonzalez, Judit Gimenez, and Jesus Labarta, "Performance Data Extrapolation in Parallel Codes". ICPADS '10: Proceedings of the 16th International Conference on Parallel and Distributed Systems, 1/12/2010
  • Juan José Costa, Toni Cortes, Xavier Martorell, Javier Bueno-Hedo and Eduard Ayguadé, "Transient Congestion Avoidance in Software Distributed Shared Memory Systems". 11th International Conference on Parallel and Distributed Computing, Applications and Technologies (PDCAT-10), pp. 357-364, 8/12/2010
  • K. Huck and J. Labarta, "Detailed load balance analysis of large scale parallel applications". 39th International Conference on Parallel Processing (ICPP 2010), 1/9/2010
  • Kamil Kedzierski, Miquel Moreto, Francisco J. Cazorla and Mateo Valero, "Adapting Cache Partitioning Algorithms to Real pseudo-LRU Replacement Policies". In 24th IEEE International Parallel & Distributed Processing Symposium (IPDPS), Atlanta, Georgia, 19/4/2010
  • M. Macías and J. Guitart, "Using Resource-level Information into Nonadditive Negotiation Models for Cloud Market Environments". 12th IEEE/IFIP Network Operations and Management Symposium (NOMS'10), Osaka, Japan, pp. 325-332, 19/4/2010
  • M. Macías, J.O. Fitó, and J. Guitart, "Rule-based SLA Management for Revenue Maximisation in Cloud Computing Markets". 6th IEEE/IFIP International Conference on Network and Service Management (CNSM'10), Niagara Falls, Canada, pp. 354-357 (Short Paper), 25/10/2010
  • Maja Etinski, Julita Corbalan, Jesus Labarta, Mateo Valero, "Optimizing Job Performance Under a Given Power Constraint In HPC Centers". International Green Computing Conference, 15/8/2010
  • Marjanovic V.; Labarta J.; Ayguade E.; Valero M. , "Overlapping Communication and Computation by Using a Hybrid MPI/SMPSs Approach". 24th International Conference on Supercomputing. Epochal Tsukuba, Tsukuba, Japan, 1/6/2010
  • Mauricio Álvarez, Alex Ramirez, Mateo Valero, Arnaldo Azevedo, Cor Meenderinck and Ben Juurlink, "Performance Evaluation of Macroblock-level Parallelization of H.264 Decoding on a cc-NUMA Multiprocessor Architecture". In 4CCC. 4th Colombian Computing Conference, Bucaramanga (Colombia), 1/4/2010
  • Mehmet Kayaalp, Oğuz Ergin, Osman Ünsal, Mateo Valero, "Exploiting Inactive Rename Slots for Detecting Soft Errors". 23th Conference on Architecture of Computing Systems (ARCS’10), 18/2/2010
  • Miquel Moreto, Francisco Javier Cazorla, Rizos Sakellariou and Mateo Valero, "Load Balancing Using Dynamic Cache Allocation". ACM International Conference on Computing Frontiers (CF), 18/5/2010
  • Nicolas Poggi, David Carrera, Ricard Gavaldà, Jordi Torres and Eduard Ayguadé, "Characterization of Workload and Resource Consumption for an Online Travel and Booking Site". 2010 IEEE International Symposium on Workload Characterization (IISWC-2010), 2/12/2010
  • Nikola Vujic, Marc Gonz�lez, Eduard Ayguad�, Xavier Martorell, Alex Ramirez and Felipe Cabarcas, "DMA++: On the Fly Data Realignment for On-Chip Memories". In 16th IEEE International Symposium on High-Performance Computer Architecture, Bangalore (India), 1/1/2010
  • Paul Carpenter, Alex Ramirez and Eduard Ayguadé, "Buffer sizing for self-timed stream programs on heterogeneous distributed memory multiprocessors". In International conference on High-Performance Embedded Architectures and Compilers (HiPEAC) 2010), Pisa (Italy), 1/1/2010
  • Paul M. Carpenter, Alex Ramirez, Eduard Ayguade, "Starsscheck: a tool to find errors in task-based parallel programs". Proceedings of the 16th international Euro-Par conference on Parallel processing, 1/9/2010
  • Petar Radojkovic, Vladimir Cakarevic, Javier Verdu, Alex Pajuelo, Francisco J. Cazorla, Mario Nemirovsky and Mateo Valero, "Thread to Strand Binding of Parallel Network Applications in Massive Multi-Threaded Systems". In 15th ACM SIGPLAN Annual Symposium on Principles and Practice of Parallel Programming, Bangalore, India, 9/1/2010
  • Pilar Gonález-Férez, Juan Piernas, and Toni Cortes, "Simultaneous Evaluation of Multiple I/O Strategies". 22nd International Symposium on Computer Architecture and High Performance Computing, 25/10/2010
  • Ramon Bertran, Marc Gonzalez, Xavier Martorell, Nacho Navarro, and Eduard Ayguade, "Decomposable and Responsive Power Models for Multicore Processors using Performance Counters". Proc. of the 24th ACM Int. Conf. on Supercomputing, pp.147-158, 1/6/2010
  • Ramon Bertran, Marc Gonz�lez, Yolanda Becerra, David Carrera, Vicen� Beltran, Xavier Martorell, Jordi Torres, Eduard Ayguad�, "Accurate Energy Accounting for Shared Virtualized Environments using PMC-based Power Modeling Techniques". 11th ACM/IEEE International Conference on Grid Computing (Grid 2010), 25/10/2010
  • Ramón Nou, Jacobo Girarlt, Julita Corbalan, Enric Tejedor, J. Oriol Fitó, Josep M. Pérez, Toni Cortes, "XtreemOS Application Execution Management: A scalable approach". 11th ACM/IEEE International Conference on Grid Computing (Grid 2010), 25/10/2010
  • Roberto Gioiosa, "Towards sustainable exascale computing". The 18th IEEE/IFIP VLSI System on Chip Conference (VLSI-SoC), 27/9/2010
  • Roberto Gioiosa, Sally A. McKee, Mateo Valero , "Designing OS for HPC Applications: Scheduling". The 2010 IEEE International Conference on Cluster Computing (CLUSTER), 20/9/2010
  • Roger Ferrer, Vicenç Beltran, Marc Gonzàlez, Xavier Martorell and Eduard Ayguadé, "Analysis of Task Offloading for Accelerators". Proc. of the 5th International Conference, HiPEAC 2010, Pisa, Italy, January 25- 27, 2010, 25/1/2010
  • Sebastian Isaza, Friman Sanchez, Georgi Gaydadjiev, Alex Ramirez, Mateo Valero, "Scalability Analysis of Progressive Alignment on a Multicore". Proceedings of the 2010 International Conference on Complex, Intelligent and Software Intensive Systems(CISIS '10), 1/7/2010
  • T. Cortes, "Implications of Exascale Computing for Storage Systems Research". IEEE International Conference on Cluster Computing, 22/9/2010
  • Tanausu Ramirez, Oliverio Santana, Alejandro Pajuelo and Mateo Valero, "Efficient runahead threads". PACT 2010. International Conference on Parallel Architectures and Compiler Techniques, 1/9/2010
  • Tim Harris, Adrian Cristal, Sasa Tomic, Osman Unsal, "Dynamic Filtering: Multi-purpose Architecture Support for Language Runtime Systems". In the 15th International Conference on Architectural Support for Programming Languages and Operating Systems (ASPLOS XV), 18/3/2010
  • Victor Jimenez, Carlos Boneti, Francisco Cazorla, Roberto Gioiosa, Eren Kursun, Chen-Yong Cher, Canturk Isci, Alper Buyuktosunoglu, Pradip Bose, Mateo Valero, "Power and Thermal Characterization of POWER6 System". The 19th International Conference on Parallel Architectures and Compilation Techniques (PACT), 13/9/2010
  • Victor Jimenez, Roberto Gioiosa, Eren Kursun, Francisco Cazorla, Chen-Yong Cher, Alper Buyuktosunoglu, Pradip Bose, Mateo Valero, "Trends and techniques for energy efficient architectures". The 18th IEEE/IFIP VLSI System on Chip Conference (VLSI-SoC), 28/9/2010
  • Vladimir Marjanovic, Jesús Labarta, Eduard Ayguadé and Mateo Valero, "Effective Communication and Computation Overlap with Hybrid MPI/SMPSs". 15th ACM SIGPLAN Annual Symposium on Principles and Practice of Parallel Programming (PPoPP), 10/1/2010
  • Vladimir Subotic, Jesus Labarta and Mateo Valero, "Simulation environment to study overlapping of communication and computation". IEEE International Symposium on Performance Analysis of Systems and Software, 1/3/2010
  • Vladimir Subotic, Jose Carlos Sancho, Jesus Labarta and Mateo Valero , "A simulation framework to automatically analyze the communication-computation overlap in scientific applications". IEEE International Conference on Cluster Computing, 1/9/2010
  • Yoav Etsion, Felipe Cabarcas, Alejandro Rico, Alex Ramirez, Rosa M. Badia, Eduard Ayguade, Jesus Labarta, Mateo Valero, "Task Superscalar: An Out-of-Order Task Pipeline". IEEE/ACM Intl. Symp. on Microarchitecture (MICRO-43), 6/12/2010

National Conferences

  • Adrian Jackson, Adam Carter, Joachim Hein, Jan Westerholm, Mats Aspnäs, Matti Ropo, and Alejandro Soba, "EUFORIA HPC: Massive Parallelisation for Fusion Community". PDP,
  • Daniel Jimenez, Raul Sanchez, Carlos Alvarez, Julian Morillo-Pozo, Daniel Cabrera, Xavier Martorell and Eduard Ayguade, "GPFPGA: entorno para la generación automática de códigos HDL portables entre FPGAs". X Jornadas de Computación Reconfigurable y Aplicaciones (JCRA'10), pp. 19-26, 10/9/2010

Workshops

  • Alejandro Duran, Roger Ferrer, Michael Klemm, Bronis R. de Supinski and Eduard Ayguade, "A Proposal for User-defined Reductions in OpenMP". 6th International Workshop on OpenMP (IWOMP 2010), 14/6/2010
  • Augusto Vega, Alejandro Rico, Felipe Cabarcas, Alex Ramirez, Mateo Valero, "Comparing last-level cache designs for CMP architectures". IFMT '10: International Forum on Next-Generation Multicore/Manycore Technologies, 1/6/2010
  • Eduard Ayguade, James Beyer, Alejandro Duran, Roger Ferrer, Grant Haab, Kelvin Li and Federico Massaioli, "An extension to improve OpenMP tasking control". 6th International Workshop on OpenMP (IWOMP 2010), 14/6/2010
  • Gulay Yalcin, Osman Unsal, Ibrahim Hur, Adrian Cristal, Mateo Valero, "FaulTM: Fault-Tolerance Using Hardware Transactional Memory". he 3nd Workshop on Parallel Execution of Sequential Programs on Multi-core Architectures (PESPMA 2010), 18/6/2010
  • I. Goiri, F. Julià, J.O. Fitó, M. Macías, and J. Guitart, "Resource-level QoS Metric for CPU-based Guarantees in Cloud Providers". 7th International Workshop on Economics of Grids, Clouds, Systems, and Services (GECON 2010), Ischia, Italy, 31/8/2010
  • Jacobo Girarlt, Christine Morin, Yvon Jegu, "Easing Application Execution in Grids with XtreemOS Operating System". 2nd XtreemOS summit, 30/8/2010
  • Jesus Labarta, "Programming Models and Scalability". Scalable Algorithms for Large-Scale Systems@ SC'10, 15/11/2010
  • Jesus Labarta, "On the route to Exascale". ATOMIC AND MOLECULAR SIMULATIONS : CHALLENGES FOR THE NEXT DECADE. ZCAM Launching meeting, 28/5/2010
  • Judit Giménez, Jesús Labarta, F. Xavier Pegenaute, Hui-Fang Wen, David Klepacki, I-Hsin Chung,, Guojing Cong, Felix Voigtlaender and Bernd Moht, "Guided Performance Analysis Combining Profile and Trace Tools". PROPER2010, 30/8/2010
  • Kamil Kedzierski, Francisco Cazorla, Roberto Gioiosa, Alper Buyuktosunoglu, Mateo Valero. , "Power and Performance Aware Reconfigurable Cache for CMPs". Workshop on Next Generation Multicore/Manycore Technologies (IFMT), in conjunction with ISCA, 7/6/2010
  • Maja Etinski, Julita Corbalan, Jesus Labarta, Mateo Valero, "BSLD Threshold Driven Power Management Policy for HPC Centers". IEEE International Symposium on Parallel&Distributed Processing, HPPAC workshop, 19/4/2010
  • Marco Paolieri, I. Bonesana, Roberto Gioiosa, Mateo Valero, "J-DSE: Joint Software and Hardware Design Space Exploration for Application Specific Processors". Programmability Issues for Multi-Core Computers (MULTIPROG), 24/1/2010
  • Michael Wong, Michael Klemm, Alejandro Duran, Tim Mattson, Grant Haab, Bronis R. de Supinski and Andrey Churbanov, "Towards an Error Model for OpenMP". 6th International Workshop on OpenMP (IWOMP 2010), 14/6/2010
  • Milan Pavlovic, Yoav Etsion, Alex Ramirez, "Can Manycores Support the Memory Requirements of Scientific Applications?". Workshop on Applications for Multi and Many Core Processors (A4MMC), 2/6/2010
  • Nebojša Miletić, Vesna Smiljković, Cristian Perfumo, Tim Harris, Adrián Cristal, Ibrahim Hur, Osman Unsal, Mateo Valero, "Transactification of a real-world system library". Fifth ACM SIGPLAN Workshop on Transactional Computing TRANSACT, 18/4/2010
  • R. Ferrer, J. Planas, P. Bellens, A. Duran, M. Gonzalez, X. Martorell, R. Badia. E. Ayguade, J. Labarta, "Optimizing the Exploitation of Multicore Processors and GPUs with OpenMP and OpenCL". on proceedings of the The 23rd International Workshop on Languages and Compilers for Parallel Computing (LCPC2010), 7/10/2010
  • Ramon Nou and Jacobo Girarlt, "XtreemOS: applications execution management". 2nd XtreemOS summer school, 7/7/2010
  • Roger Ferrer, Alejandro Duran, Xavier Martorell, Eduard Ayguadé, "Harmonizing serial optimizations with OpenMP". 15th Workshop on Compilers for Parallel Computing (CPC-2010), 7/7/2010
  • Rubén Titos-Gil, Manuel E. Acacio, José M. García, Tim Harris, Adrián Cristal, Osman Unsal, Ibrahim Hur, Mateo Valero, "Hardware Transactional Memory with Software-Defined Conflicts". Fifth ACM SIGPLAN Workshop on Transactional Computing TRANSACT, 18/4/2010
  • Sebastián Isaza, Friman Sánchez, Georgi Gaydadjiev, Alex Ramirez and Mateo Valero, "Scalability Analysis of Progressive Alignment in a Multicore". In International Workshop on Multi-Core Computing Systems (MuCoCoS 2010), Krakow (Poland), 1/2/2010
  • Victor Jimenez, Francisco Cazorla, Roberto Gioiosa, Eren Kursun, Canturk Isci, Alper Buyuktosunoglu, Mateo Valero, "A Case for Energy Aware Accounting in Large Scale Computing Facilities: Cost Metrics and Implications for Processor Design.". Workshop on Architectural Concerns in Large Datacenters (ACLD), in conjunction with ISCA, 7/6/2010
  • Yoav Etsion, Alex Ramirez, Rosa M. Badia, Eduard Ayguade, Jesus Labarta, Mateo Valero, "Task Superscalar: Using Processors as Functional Units". USENIX Workshop on Hot Topics In Parallelism (HotPar), 1/6/2010

Theses

  • Marc Casas, “Spectral Analysis of Executions of Computer Programs and its Applications on Performance Analysis”. March 2010. Advisor Rosa M. Badia and Jesús Labarta.
  • Miquel Moretó, “Improving Cache Behavior in CMP Architectures through Cache Partitioning Techniques”. March 2010. Advisor Mateo Valero and Francisco J. Cazorla.
  • Tanausú Ramírez, “Runahead Threads”. April 2010. Advisor Mateo Valero, Alex Pajuelo and Oliverio J. Santana.
  • Isaac Gelado, “On the Programmability of Heterogeneous Massively-Parallel Computing Systems”. July 2010. Advisor Nacho Navarro and Wen-mei W. Hwu.


Earth Sciences 2010 Publications

Journals

  • Folch, A.; A. Costa; A. Durant; and G. Macedonio, "A model for wet aggregation of ash particles in volcanic plumes and clouds: 2. Model application". Journal of Geophysical Research, 115, B09202, 16 pp, 1/9/2010
  • Corradini, S.; Merucci, L.; Folch, A, "Volcanic Ash Cloud Properties: Comparison Between MODIS Satellite Retrievals and FALL3D Transport Model". IEEE Geoscience and Remote Sensing Letters, 7 (4): 248 - 252, 9/9/2010
  • Costa, A.; A. Folch; and G. Macedonio, "A model for wet aggregation of ash particles in volcanic plumes and clouds: 1. Theoretical formulation". Journal of Geophysical Research, 115, B09201, 14 pp, 1/9/2010
  • D. K. Papanastasiou; A. Poupkou; E.Katragkou; V. Amiridis; D.Melas; N.Mihalopoulos; S. Basart; C. Pérez and J.M. Baldasano, "An Assessment of the Efficiency of Dust Regiona lModelling to Predict Saharan Dust Transport Episodes". Advances in Meteorology, 2010 (ID 154368): 9 pages, 19/7/2010
  • F. Amato; S. Nava; F. Lucarelli; X. Querol; A. Alastuey; J.M. Baldasano; and M. Pandolfi, "A comprehensive assessment of PM emissions from paved roads: Real-world Emission Factors and intense street cleaning trials". Science of The Total Environment, 408 (20): 4309-4318, 15/9/2010
  • Folch A.; Sulpizio, R, "Evaluating the long-range volcanic ash hazard using supercomputing facilities. Application to Somma-Vesuvius (Italy), and consequences on civil aviation over the Central Mediterranean Area". Bulletin of Volcanology, 72(9):1039-1059, 13/7/2010
  • José M. Baldasano; María Gonçalves; Albert Soret and Pedro Jiménez-Guerrero, "Air pollution impacts of speed limitation measures in large cities: The need for improving traffic data in a metropolitan area". Atmospheric Environment, 44 (25): 2997-3006, 2/8/2010
  • M. Gonçalves; D. Dabdub; W. L. Chang; F. Saiz; O. Jorba; and J. M. Baldasano, "The impact of different nitrous acid sources in the air quality levels of the Iberian Peninsula". Atmos. Chem. Phys. Discuss., 10: 28183–28230, 17/11/2010
  • M.T. Pay; M. Piot; O. Jorba; S. Gassó; M. Gonçalves; S. Basart; D. Dabdub; P. Jiménez-Guerrero; and J.M. Baldasano, "A full year evaluation of the CALIOPE-EU air quality modeling system over Europe for 2004". Atmospheric Environment, 44 (27): 3322-3342, 2/9/2010
  • Pedros, R.; Estelles, V.; Sicard, M.; Gomez-Amo, J. L.; Utrillas, M. P.; Martinez-Lozano, J. A.; Rocadenbosch, F.; Perez, C.; Baldasano Recio, J. M, "Climatology of the Aerosol Extinction-to-Backscatter Ratio from Sun-Photometric Measurements". IEEE Transactions on Geoscience and Remote Sensing, Vol. 48, NO. 1, 237-249, 1/1/2010
  • Scollo S.; Folch, A.; Coltelli, M.; Realmuto, V.J, "Volcanic aerosol dispersal: a comparison between MISR data and numerical simulations". Journal of Geophysical Research, 115, D24210, 21/12/2010
  • Wilco Hazeleger; Camiel Severijns; Tido Semmler; Simona Stefãnescu; Shuting Yang; Xueli Wang; Klaus Wyser; Emanuel Dutra; JoséM. Baldasano; Richard Bintanja; Philippe Bougeault; Rodrigo Caballero; Annica M. L. Ekman; Jens H. Christensen; Bart van den Hurk; Pedro Jimenez; Colin Jones; Per Kållberg; Torben Koenigk; Ray McGrath; Pedro Miranda; Twan van Noije; Tim Palmer; José A. Parodi; Torben Schmith; Frank Selten; Trude Storelvmo; Andreas Sterl; Honoré Tapamo; Martin Vancoppenolle; Pedro Viterbo; Ulrika Willén, "EC-Earth: A Seamless Earth System Prediction Approach in Action". Bulletin of the American Meteorological Society, 88: 13857-1363, 7/6/2010

Book Chapters

  • Baldasano J.M., "Herramientas y Modelos de Predicción: Oportunidades y Dificultades". XVII Foro Universitario Juan Luis Vives. Medio Ambiente, un Medio de Oportunidades, Vol. 1. Editores: J.L. Rubio y A.M. Ferro, 1/2/2010
  • Baldasano J.M.; A. Soret; O. Jorba; E. López, "Metodología para la Evaluación del Impacto Ambiental sobre la Atmósfera de Plantas de Valorización Energética". Evaluación ambiental: cooperación, desarrollo y sostenibilidad. Libro de actas del V congreso. V CONEIA. Ed. Ministerio Agric Pesca Alimen: 179-185, 11/3/2010
  • Baldasano J.M.; P. Jimenez-Guerrero; E. Lopez; M. Gonçalves; and A. Soret, "Air quality models sensitivity to on-road traffic speed representation. Effects on air quality of 80 km h-1 speed limit in the Barcelona Metropolitan Area". Air Pollution Modelling and its Application XX. Editors: Down G. Steyn and S.T. Rao. Springer: 229-235, 1/1/2010
  • Gonçalves-Ageitos, María; Jiménez, Pedro; Baldasano, José M, "Alternatives for a cleaner air in urban areas: a modelling study. Assesssing variations in urban air quality when introducing on-road traffic management strategies by means of high resolution modelling". VDM Verlag Dr. Müller Aktiengesellschaft & Co. KG Editors, 18/3/2010
  • Papayannis A.; R.E. Mamouri; V. Amiridis; C. Pérez; G. Tsaknakis; J.M. Baldasano, "Systematic lidar observations of Saharan dust layers over Athens, Greece, in the frame of the EARLINET project (2004-2006)". Proceedings of the 8th International Symposium on Tropospheric Profiling. Editors, A. Apituley, H.W.J. Russchenberg, W.A.A. Monna: S04-O01–1-4, 17/11/2010
  • Piot M.; M.T. Pay; O. Jorba; P. Jiminez-Guerrero; E. Lopez; S. Gasso; J.M. Baldasano, "Annual Dynamics and Statistical Evaluation of an Air Quality Forecasting System (CALIOPE) with High Resolution for Europe". Air Pollution Modeling and its Application XX. Editors: Down G. Steyn and S.T. Rao. Springer: 241-245, 1/1/2010

International Conferences

  • Baez, W.; A. Folch; A. Costa; J. Viramonte, "Fallout Hazards Associated with a Possible Renewal of Explosive Activity at Cerro Blanco Volcanic Complex, Austral Puna, Argentina". Cities on Volcanoes 6, Tenerife, 4/6/2010
  • Baldasano J.M, "Mejora de la Calidad del Aire por la limitación de velocidad a 80 km/h en las vías de acceso a Barcelona". Jornada Europea de Ciudades y Regiones para la Mejora de la Calidad del Aire, Barcelona, 17/6/2010
  • Baldasano J.M, "HPC & Earth Sciences Research at the Barcelona Supercomputing Center". IS_ENES 1st Gral. Assembly, Barcelona, 26/5/2010
  • Baldasano J.M, "Earth System Modeling Framework: Computation+Data". DEISA PRACE Symposium 2010, Barcelona, 11/5/2010
  • Baldasano J.M, "L’aprofitament energètic". Jornada “El futur de la gestió dels residus municipals a Catalunya”. Diputación de Barcelona-Fundación Forum Ambiental, Barcelona, 27/4/2010
  • Baldasano J.M, "CALIOPE-CAN: Sistema de Modelización de la Calidad del Aire en Canarias". I Jornadas sobre Calidad del Aire y Meteorología Ambiental en Canarias, Santa Cruz de Tenerife, 17/3/2010
  • Baldasano J.M., "Numerical Prediction of Mineral Dust". Lectures on Atmospheric Mineral Dust and its Impact on Human health, Environment and Economy. Org. AEMET, BSC-CNS, EUMETSAR and WMO. Barcelona (Spain), 13/11/2010
  • Baldasano J.M., "Evolución del Cambio Climático. Necesidad de una reflexión sobre el consumo energético". Cursos de “La Granda”, Fundación Escuela Asturiana de Estudios Hispánicos: Ciencia, Ética y futuro. dtor. Santiago Grisolia. La Granda (Asturias), 17/8/2010
  • Baldasano J.M., "Evidencias del Actual Cambio Climático". Universitat de Girona, Girona, España, 24/2/2010
  • Baldasano J.M. y A. Soret, "Balanços de carboni–Emissions". Grup d’Experts sobre Canvi Climàtic de Catalunya, Monestir de les Avellanes, Lleida, 11/11/2010
  • Baldasano J.M; O. Jorba, "CALIOPE: Sistema de Información para el Pronóstico y Vigilancia de la Calidad del Aire en Anadalucia". Jornadas Técnicas de Participación-Evaluación de la Calidad del Aire en Andalucia, Sevilla-Malaga, 3/12/2010
  • Barsotti, S.; M. Coltelli; A. Costa; A. Folch; G. Macedonio; L. Nannipieri; A. Neri; M. Prestiffilippo; S. Scollo; G. Spata, "Investigationg the model-dependent uncertainty of volcanic ash dispersal forecasts". 28th IUGG Conference on Mathematical Geophysics, Pisa, Italy, 7/6/2010
  • Basart S., M.T. Pay, M. Piot, C. Pérez, E. Cuevas, O. Jorba, J.M. Baldasano, "Aerosol Optical Depth over Europe: Evaluation of the CALIOPE air quality modelling system with direct-sun AERONET observations". Geophysical Research Abstracts, Vol. 12, EGU2010-2162. Viena, 2/5/2010
  • Corradini, S.; L. Merucci; A. Folch, "Comparison between volcanic ash satellite retrievals and FALL3D transport model". European Geosciences Union (EGU), General Assembly 2010, Vienna, Austria, 2/5/2010
  • Cuevas E.; J.M. Baldasano; C. Pérez; C. Camino; E. Terradellas; S. Basart; K. Serradell, "Service chain analysis in support to health community O-INT_3.1 Core requirements to support forecast of meningitis". Second MACC Assembly, Toulouse, 18/10/2010
  • Folch, A, "Forum on the assessment of volcanic ash threat: learning and considerations from the 2010 Eyjafjallajökull eruption". Cities on Volcanoes 6, Tenerife, 4/6/2010
  • Folch, A.; G. Córdoba; H. Delgado-Granadox; A. García-Reynoso; A. Muñoz; R. Parra; G. Salmuni; J. Viramonte, "CENIZA: A Latino-American Network for Modelling and Monitoring Volcanic Ash and Aerosols and its Impact on Infrastructures and Air Quality". Cities on Volcanoes 6, Tenerife, 4/6/2010
  • Folch, A.; J.M. Baldasano; S. Gassó; O.Jorba, M. Val, "Modelización del transporte atmosférico y calidad del aire en el BSC-CNS. Estado actual y prespectivas futuras". Primera reunión de Red Iberoamericana para el para el monitoreo y modelización de cenizas volcánicas y su impacto en la calidad del aire, México D.F., 5/4/2010
  • Gonçalves M., M. Piot, O. Jorba, D. Carrió, S. Gassó and J.M. Baldasano, "Near Real Time Evaluation of the Spanish Air Quality Forecast System: CALIOPE". HARMO13 Conference, Paris (France), 4/6/2010
  • Gonçalves M., M. Piot, O. Jorba, M. T. Pay, S. Gassó, J.M.Baldasano, "Near Real Time Evaluation System of the Spanish Air Quality Forecasting System CALIOPE". Geophysical Research Abstracts, Vol. 12, EGU2010-5266, Viena, 2/5/2010
  • González Y., E. Cuevas, S. Alonso-Pérez, S. Rodríguez, J. Rodríguez, J.C. Guerra, J.M. Baldasano, "Long Term Ozone Observations at Izaña Atmospheric Observatory (1988-2009)". ACP Symposium 2010 (Atmospheric Chemistry and Physics), Interlaken (Switzerland), 8/6/2010
  • Guirado C.; E. Cuevas; V. Cachorro; M. Mimouni; L. Zeudmi; C. Toledano; S. Alonso; S. Basart; L. Blarel; P. Goloub; J.M. Baldasano, "Preliminar characterization of columnar aerosols properties (AOD-AE) at the Saharan Tamanrasset (Algeria) station". 37th AnnualEuropeanMeetingAtmosphericStudies Optical Methods, Valladolid (España), 23/8/2010
  • Haustein K., C. Perez, J.M. Baldasano, D. Müller, M. Tesche, M. Esselborn, R. Washington, C. Prigent and B. Laurent, "NMMB/BSC-DUST: model validation at regional scale in Northern Africa". Geophysical Research Abstracts, Vol. 12, EGU2010-12347. Viena, 2/5/2010
  • Jiménez-Guerrero P., J. P. Montávez, J.M.Baldasano, "Evaluation of a Regional Model Climatology in Europe Using Dynamical Downscaling from a Seamless Earth Prediction Approach (Ec-Earth)". Geophysical Research Abstracts, Vol. 12, EGU2010-11348. Viena, 2/5/2010
  • Jiménez-Guerrero P., M. Val, J.P. Montáve and J. M. Baldasano, "Evaluation of Regional Model Climatology in Europe Using Dynamical Downscaling Driven by EC-Earthv2.0". EC-Earth Summer 2010 Meeting, Barcelona, 1/6/2010
  • Jorba O., C. Perez, K. Haustein, Z. Janjic, D. Dabdub, J.M. Baldasano, A. Badia, M. Spada, "Global impact of NO2 photo-excitation using a global online chemical transport model". Geophysical Research Abstracts, Vol. 12, EGU2010-5248. Viena, 2/5/2010
  • Jorba O., C. Perez, K. Haustein, Z. Janjic, D. Dabdub, J.M. Baldasano, A. Badia, M. Spada, "Status of Development and Firsts Results at Global Scale of NMMB/BSC-CHEM: an online multiscale air quality model". Geophysical Research Abstracts, Vol. 12, EGU2010-5228. Viena, 2/5/2010
  • Marras S.; Vazquez M.; Jorba O.; Aubry R.; Houzeaux G.; J.M. Baldasano, "Application of a galerkin Finite Element Scheme to Atmospheric Bouyant and Gravity Driven Flows". 48th AIAA Aerospace Sciences Meeting, Orlando (Florida, USA), 7/1/2010
  • Pay, M.T., M. Piot, O. Jorba, S. Basart, S. Gassó, D. Dabdub, P. Jiménez-Guerrero, J.M.Baldasano, "Chemical Composition of Particulate Matter in Spain: Modeling Evaluation of the CALIOPE System for 2004". Geophysical Research Abstracts, Vol. 12, EGU2010-5279. Viena, 2/5/2010
  • Piot M., M.T. Pay, O. Jorba, S. Basart, S. Gassó, X. Querol, M. Pandolfi, J.M. Baldasano and the DAURE team, "Preliminary Modelling Results of the Chemical Composition of Particulate Matter in NE Spain for the DAURE Campaign". Geophysical Research Abstracts, Vol. 12, EGU2010-5259. Viena, 2/5/2010
  • Rincón A.; O. Jorba; J.M. Baldasano, "Development of a short-term irradiance prediction system using post-processing tools on WRF-ARW meteorological forecasts in Spain". 10th EMS Annual Meeting - 8th European Conference on Applied Climatology (ECAC). Zürich (Switzerland), 13/9/2010
  • Sulpizio, R.; A. Folch, "Far-range Volcanic Ash Hazard from Somma-Vesuvius. Consequences for Civil Aviation over the Central Mediterranean Area". Cities on Volcanoes 6, Tenerife, 4/6/2010
  • Terradellas E.; J.M. Baldasano; E. Cuevas; M.Á. Martínez, "Current and planned activities of the WMO SDS-WAS Regional Center for Northern Africa, Middle East and Europe". EUMETSAT Meteorological Satellite Conference. Cordoba (España), 20/9/2010

National Conferences

  • Fernando Martín; Alberto González Ortiz; Enrique Bailly-Bailliere; Rafael Borge; Rosa Soler; José María Baldasano; Jose Luis Palau; Roberto San José; Elena Agirre; José Antonio Souto; Marivi Alvizu; Eva Pérez; Antonio Lozano; Eloy Piernagorda; Cecilia Soriano; David Cartelle; J.A. García-Moya; Pedro Jiménez-Guerrero; Carlos G. Giralda; Marta G. Vivanco; I. Palomino; Óscar Hernanz, "Red Temática de Modelización de la Contaminación Atmosférica". 10 Congreso Nacional de Medio Ambiente. CONAMA 10. Madrid, España, 22/11/2010
  • Jorba O., C. Pérez, K. Haustein, D. Dabdub, J. M. Baldasano, A. Badia, M. Spada, "Development of an integrated chemical weather prediction system for environmental applications at meso to global scales: NMMB/BSC-CHEM". Segones Jornades de Meteorologia i Climatologia de la Mediterrània Occidental, Valencia, 11/3/2010
  • Piot M., M. T. Pay, O. Jorba, S. Basart, S. Gassó, X. Querol, M. Pandolfi, A. Alastuey, D. Dabdub, J. M. Baldasano, "Evaluating the CALIOPE air quality modelling system: gasphase chemistry and chemical composition of particulate matter over Iberian Peninsula for 2004 at high horizontal". Segones Jornades de Meteorologia i Climatologia de la Mediterrània Occidental, Valencia, 11/3/2010

Workshops

  • Baldasano J.M.; M. Piot; O. Jorba; M. Goncalves; M.T. Pay; S. Basart; P. Jiménez and S. Gassó, "CALIOPE: an Operational Air Quality Forecasting System for Europe and Spain". Mesoscale Modelling For Air Pollution Applications: Achievements And Challenges (COST 728 Final Workshop), Organisers: COST 728, WMO/GURME and MEGAPOLI, Geneva, 25/2/2010
  • Baldasano J.M.; M. T. Pay; O. Jorba; J. Ortiz; M. Gonçalves; S. Gassó; P. Jiménez-Guerrero, "Evaluation of the Spanish Operational Air quality Forecasting System: Diagnostic and Near Real-Time". International Workshop on Air Quality Forecasting Research (IWAQFR). Org. WMO-NOAA, Quebec (Canada), 16/11/2010
  • Folch ,A.; A. Costa, "Modeling volcanic ash transport using FALL3D: model description, validation results and future perspectivas". The 5th MWO International Workshop on Volcanic Ash, Santiago de Chile, Chile, 22/3/2010
  • J. M. Baldasano; M. T. Pay; O. Jorba; J. Ortiz; M. Gonçalves; S. Basart; S. Gassó; P. Jiménez-Guerrero, "Evaluation of the Spanish operational air quality forecasting system: diagnostic and near real time". International Workshop on Air Quality Forecasting Research. Québec, Canada, 16/11/2010


Life Sciences 2010 Publications

Journals

  • Alías, M., Ayuso-Tejedor, S., Fernández-Recio, J., Cativiela, C., Sancho, J., "Helix propensities of conformationally restricted amino acids. Non-natural substitutes for helix breaking proline and helix forming alanine.". Org. Biomol. Chem. 8, 788-792., 22/4/2010
  • Banás,P.; Hollas,D.; Zgarbová, Jurecka,P.; Orozco,M.; Cheatham,T.E.; Sponer,J.; Otyepka,M, "Performance of molecular mechanics force-fields for RNA simulations. Stability of UUCG and GNRA hairpins". J. Chem. Theory Comput., 2010, 6 (12), pp 3836–3849, 9/11/2010
  • C.Pons, M.D’Abramo, D.I.Svergun, M.Orozco, P.Bernadó and J.Fernández-Recio., "Structural characterization of protein-protein complexes by integrating computational docking with small-angle scattering data". J.Mol.Biol (2010). 403, 217-230, 30/8/2010
  • Curr. Opin. Struct. Biol. 20, 139-141., "Protein docking by Rotation-Based Uniform Sampling (RotBUS) with fast computing of intermolecular contact distance and residue desolvation". BMC Bioinformatics 11, 352, 22/9/2010
  • E.M.Novoa, L.Ribas de Pouplana, X.Barril and M.Orozco., "Ensemble docking from homology models". J. Chem. Theory Comput., 2010, 6 (8), pp 2547–2557, 16/7/2010
  • Eliahoo, E., Ben Yosef, R., Pérez-Cano, L., Fernández-Recio, J., Glaser, F., Manor, H. , "Mapping of interaction sites of the Schizosaccharomyces pombe protein Translin with nucleic acids and proteins: a combined molecular genetics and bioinformatics study.". Nucleic Acids Res. 38, 2975-2989., 22/1/2010
  • F.Raimondi, M.Orozco and F.Fanelli, "Deciphering the deformation modes associated with function retention and specialization in members of the Ras Superfamily". Structure. (2010), 18, 402-414, 10/3/2010
  • Fernández-Recio, J., Sternberg, M., "The 4th meeting on the Critical Assessment of Predicted Interaction (CAPRI) held at the Mare Nostrum, Barcelona". Proteins 78, 3065-3066, 22/5/2010
  • Fernández-Recio, J., Verma, C. , "Theory and simulation: integrating models into experimental scenarios.". Curr. Opin. Struct. Biol. 20, 139-141., 22/1/2010
  • Frank Wallrapp, Alexander Voityuk, and Victor Guallar, "Temperature Effects on Donor-Acceptor Couplings in Peptides. A Combined Quantum Mechanics and Molecular Dynamics Study". Journal of Chemical Theory and Computation, 10:3341-3348, 1/10/2010
  • G.Portella and M.Orozco., "Multiple routes characterize the folding of a small DNA hairpin". Angew. Chem. Int. Ed. Eng. (2010), 49, 7673-7676., 15/9/2010
  • I.Faustino, A.Pérez and M.Orozco., "Towards a Consensus view of duplex RNA flexibility". Biophysical Journal. (2010), 99, 1876-1885., 22/9/2010
  • I.Soteras, M.Orozco and F.J.Luque, "Performance of the IEF-MST solvation continuum model in the SAMPL2 blind test prediction of hydration and tautomerization free energies". J.Computer Aided Mol.Design. (2010), 24, 281-291., 19/3/2010
  • Kenneth Borrelli, Benjamin Cossins, and Victor Guallar, "Exploring hierarchical refinement techniques for induced fit docking with protein and ligand flexibility". J. Comp. Chem, 1: 1224-35, 1/4/2010
  • L.Orellana, M.Rueda, C.Ferrer-Costa, J.R.López-Blanco, P.Chacón and M.Orozco., "Approaching elastic network models to atomistic molecular dynamics". J. Chem. Theory Comput., 2010, 6 (9), pp 2910–2923, 20/8/2010
  • Pérez-Cano, Fernández-Recio, J., "Dissection and prediction of RNA-binding sites on proteins". BioMol Concepts, 1, 345–355, 7/12/2010
  • Perez-Cano, L., Fernandez-Recio, J., "Optimal protein-RNA area, OPRA: a propensity-based method to identify RNA-binding sites on proteins". Proteins 78, 25-35, 1/1/2010
  • Pérez-Cano, L., Fernández-Recio, J. , "Structural prediction of protein-RNA interaction by computational docking with propensity-based statistical potentials.". Pac. Symp. Biocomput. 2010, 293-301, 22/3/2010
  • Pons, C., D'Abramo, M., Svergun, D., Orozco, M., Bernadó, P., Fernández-Recio, J., "Structural characterization of protein-protein complexes by integrating computational docking with small-angle scattering data". J. Mol. Biol. 403, 217-230, 22/10/2010
  • Pons, C., Grosdidier, S., Solernou A., Pérez-Cano, L., Fernández-Recio, J. , "Present and future challenges and limitations in protein-protein docking.". Proteins 78, 95-108., 22/2/2010
  • Pons, C., Solernou, A., Pérez-Cano, L., Grosdidier, S., Fernández-Recio, J., "Optimization of pyDock for the new CAPRI challenges: Docking of homology-based models, domain-domain assembly and protein-RNA binding". Proteins 78, 3182-3188, 22/5/2010
  • S.Pettifer and the EMBRACE and INB-consortia including M.Orozco., "The EMBRACE web service collection". Nucl. Acids Res. (2010) 38 (suppl 2): W683-W688., 12/5/2010
  • Solernou, A., Fernández-Recio, J., "Refinement of rigid-body protein-protein docking using backbone and side-chain minimization with a coarse-grained model.". Open Access Bioinformatics 2, 19-27., 22/2/2010
  • T.Meyer, M.D’Abramo, A.Hospital, M.Rueda, C.Ferrer-Costa, A.Pérez, O.Carrillo, C.Fenollosa, D.Perchevsky, J.L.Gelpí and M.Orozco., "MoDEL (Molecular Dynamics Extended Library). A database of atomistic molecular dynamics simulations". Structure. (2010), 18, 1399-1409., 10/11/2010
  • Valdes, H., Diaz, N., Suarez, D., Fernández-Recio, J., "Interdomain conformations in the full-length MMP-2 enzyme explored by protein-protein docking calculations using pyDock". J. Chem. Theory Comput. 6, 2204-2213, 22/6/2010
  • Vangelis Daskalakis, Stavros Farantos, Victor Guallar and Constantinos Varotsis, "Vibrational Resonances and Cu-B Displacement Controlled by Proton Motion in Cytochrome c Oxidase". Journal of Physical Chemistry B, 114: 1136-1143, 1/1/2010
  • Victor Guallar and Frank Wallrapp, "QM/MM methods: looking inside heme proteins biochemistry". Biophys Chem, 149: 1-11, 1/3/2010

Book Chapters

  • A.Pérez and M.Orozco, "Real time atomistic description of DNA unfolding". Angew. Chem. Int. Ed. Eng. (2010), 49, 4805-4808., 17/5/2010

International Conferences

  • Fernández-Recio, J., "Integration of full-atom docking energy into coarse-grained molecular mechanics for multi-scale simulations of protein-protein association". MPI 2010 Modeling of Protein Interactions. Lawrence KS (USA), 23/3/2010
  • Frank Wallrapp and Victor Guallar, "M/MM e-pathway: mapping Electron transfer processes in proteins". ACS National Meeting –San Franciscisco(USA), 2/5/2010
  • M.Orozco, "Datamining in cancer genome projects. Why a supercomputer center is needed". III International Symposium on * Biomedical Informatics in Europe, 17/11/2010
  • M.Orozco, "Biomolecular simulations. An overview". IV Spanish Portuguese Biophysical Congress, 7/7/2010
  • M.Orozco, "Challenges in molecular dynamics of macromolecules". EMBO Course on Molecular Modeling, 26/6/2010
  • M.Orozco, "Exploring DNA folding and unfolding from molecular dynamics simulations". Symposium on nucleic acid chemistry, structure and interactions, 29/5/2010
  • M.Orozco, "Computational challenges in Life Sciences". HPC-Prace meeting, 20/4/2010
  • M.Orozco, "New computational challenges in Biology". EGEE’10 User Conference, 12/4/2010
  • Pérez-Cano, L., Solernou, A., Pons, C., Fernández-Recio, J., "Structural prediction of protein-RNA interaction by computational docking with propensity-based statistical potentials". 15th Pacific Symposium on Biocomputing. Kohala Coast HI (USA), 23/3/2010

National Conferences

  • Fernández-Recio, J., "Constraints in protein-ligand and protein-protein docking". ZCAM Workshop on Constraints in Molecular Simulation. Zaragoza (Spain), 23/10/2010

Theses

  • Frank Wallrapp,“Mixed quantum and classical simulation techniques for mapping electron transfer in proteins”. December 2010. Advisor Victor Guallar.


Computer Applications in Science & Engineering (CASE) 2010 Publications

Journals

  • David Tskhakaya, Alejandro Soba, Ralf Schneider, Matthias Borchardt, Erven Yurtesen, and Jan Westerholm, "PIC/MC Code BIT1 for Plasma Simulations on HPC". PDP,
  • Edilberto Sanchez, Ralf Kleiber, Roman Hatzky, Alejandro Soba, Xavier Saez, Francisco Castejon, and Jose Maria Cela, "Linear and Nonlinear Simulations Using the EUTERPE Gyrokinetic Code". IEEE Transactions on Plasma Science,
  • F. C. Lombardo, F. D. Mazzitelli, P. I. Villar, and and D. A. R. Dalvit, "Casimir energy between media-separated cylinders: The scalar case.". Physical Review A, 82(042509), 22/2/2010
  • F. M. Cucchietti, J.-F. Zhang, F. C. Lombardo, P. I. Villar, and and R. Laflamme., "Geometric Phase with Nonunitary Evolution in the Presence of a Quantum Critical Bath". Physical Review Letters, 22/2/2010
  • Fernando C. Lombardo and Paula I. Villar, "Environmentally induced effects on a bipartite two-level system: Geometric phase and entanglement properties.". Physical Review A, 81(022115), 22/2/2010
  • G. Houzeaux, C. Samaniego, H. Calmet, R. Aubry, M. Vázquez, and P. Rem, "Simulation of Magnetic Fluid applied to Plastic Sorting". The Open Waste Management Journal. In press., 31/12/2010
  • M. Vázquez, R. Aris, G. Houzeaux, R. Aubry, and P. Villar., "A massively parallel computational electrophysiology model of the heart.". International Journal for Numerical Methods in Biomedical Engineering, Submitted, 22/2/2010
  • P.I. Villar and F.C. Lombardo y F.D. Mazzitelli. , "Quantum Field Theory Under the Influence of External Conditions, chapter Using boundary methods to compute the Casimir energy". K. Milton and M. Bordag, 21/2/2010
  • Par Strand, Bernard Guillerminet, Isabel Campos Plasencia, Jose Maria Cela, Rui Coelho, David Coster, Lars-Goran Eriksson, Matthieu Haefele, Francesco Iannone, Frederic Imbeaux, Adrian Jackson, Gabriele Manduchi, Michal Owsiak, Marcin Plociennik, Alejandro Soba, Eric Sonnendrücker, and Jan Westerholm, "A European Infrastructure for Fusion Simulations". PDP,
  • R. Aubry, G. Houzeaux and M. Vázquez, "A surface remeshing approach". International Journal for Numerical Methods in Engineering, in press., 27/7/2010
  • R. Aubry, G. Houzeaux, M. Vázquez, and J.M. Cela, "Some useful strategies for unstructured edge-based solvers on shared memory machines". Int. J. Numer. Engn., 27/7/2010
  • Xavier Sáez, Alejandro Soba, Edilberto Sánchez, Ralf Kleiber, Francisco Castejón, and José M. Cela, "Improvements of the particle-in-cell code EUTERPE for petascaling machines". Computer Physics Communications,

Book Chapters

  • Carlos Sanz-Navarro, Rogeli Grima, Alberto Garcia, Edgar Bea, Alejandro Soba, Jose Maria Cela, and Pablo Ordejon, "An efficient implementation of a QM-MM method in SIESTA". Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta),

International Conferences

  • A.C. Lesage, G. Houzeaux, M. Vázquez, and H. Coppola-Owen, "A High-Performance Parallel Incompressible Navier-Stokes Two-Phase Flow Solver using the Level Set Method for Hydrodynamics design". 5th European Conference on Computational Fluid Dynamics, Lisbon (Portugal), 14/6/2010
  • F. Mut, R. Aubry, J. Cebral, R. Lohner, and G. Houzeaux, "Deflated Preconditioned Conjugate Gradient Solvers: Extension and Improvements". AIAA Conference, Orlando (USA), 4/1/2010
  • G. Houzeaux, R. Aubry, M. Vázquez, and J.M. Cela, "Extension of fractional step techniques for incompressible flows on Parallel Architectures". PARCFD2010, Kaohsiung (Taiwan), 17/5/2010
  • G. Houzeaux, R. de la Cruz, M. Vázquez, José Maria Cela, and Herbert Owen, "Implementation issues in Alya, a Parallel Computational Mechanics Code". Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems (ScalA), New Orleans (USA), 14/11/2010
  • M. Vázquez and G. Houzeaux, "Towards the Homo-Computationalis: High Performance Computational Bio-Mechanics". PARCFD2010, Kaohsiung (Taiwan), 17/5/2010
  • M. Vázquez, R. Aris, G. Houzeaux, P. Villar, P. Lafortune, C. Labarta, D. Gil, J. Garcia-Barnes, M. Ballester, and F. Carreras, "A massively parallel electro-mechanical model of the heart for large-scale simulations". IV European Conference on Computational Mechanics (ECCM), 17/5/2010
  • M. Vázquez, R. Aris, P. Lafortune, P. Villar, G. Houzeaux, D. GIl., and J. Garcia -Barnés., "Massively Parallel Electromechanical Model of the Heart". 9th International Symposium on Computer Methoods in Biomechanics and Biomedical Engineering (CMBBE2010), Valencia (Spain), 24/2/2010
  • M. Vázquez, S. Marras, M. Moragues, O. Jorba, G. Houzeaux, and R. Aubry., "A Massive Parallel Variational Multiscale FEM Scheme Applied to Nonhydrostatic Atmospheric Dynamics.". EGU Annual Meeting, number EGU2010-9060, Vienna (Austria), 4/5/2010
  • Margarida Moragues, Mariano Vázquez, Guillaume Houzeaux, and Romain Aubry, "Variational Multiscale Stabilization of Compressible Flows in Parallel Architectures". PARCFD2010, Kaohsiung (Taiwan), 17/5/2010
  • Mohammad Jowkar, Raúl de la Cruz and José M. Cela, "Exploring a Novel Gathering Method for Finite Element Codes on the Cell/B.E. Architecture". In Proceedings of the 2010 ACM/IEEE International Conference for High Performance Computing, Networking, Storage and Analysis, SC'10, 13/11/2010
  • S. Marras, M. Vázquez, O. Jorba, G. Houzeaux, A. Folch, and R. Aubry, "Solving Nonhydrostatic Dynamics with a variational multiscale Galerkin solver: Tests and parallel performance". IPAM-UCLA Workshop, 22/6/2010
  • S. Marras, M. Vázquez, O. Jorba, R. Aubry, G. Houzeaux, and J.M. Baldasano, "Application of a Galerkin Finite Element Scheme to Atmospheric Buoyant and Gravity Driven Flows.". AIAA Conference, number AIAA 2010-690, Orlando (USA), 22/2/2010
  • S.Onggo, C. Montañola-Sales, J. Casanovas-Garcia, "Performance analysis of parallel demographic simulation". Proceedings of the 2010 European Simulation and Modeling Conference, 25/10/2010
  • Simone Marras, Mariano Vázquez, Oriol Jorba, Guillaume Houzeaux, Romain Aubry, and Arnau Folch. , "Massively parallel finite element applications to atmospheric dynamics". Model and Data Hierarchies for Simulating and Understanding Climate, Los Angeles (USA). Institute of Pure and Applied Mathematics, UCLA, 22/6/2010
  • X. Rubio, José Ma. Cela, "Large-scale agent-based simulation in archaeology: an approach using High-performance computing". Computer Applications in Archaeology, 8/4/2010

Workshops

  • J. Agustí, X. Rubio, "Neandertal extinction dynamics". II mini-workshop of Working Group 4 “Evolution and Co-evolution” of COST Action MP0801 “Physics of Competition and Conflict”, 24/2/2010
  • X. Rubio, "Simulating Societies: Large-Scale agent-based modelling in archaeology". Interdisciplinary Workshop: Peopling, Resources and Environment in Northern Gujarat (India) during the Holocene. New perspectives for simulating landscape change using High Performance Computing, 22/2/2010
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