Publications

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2020

Corpora as Evolving Entities: Embedding Corpora in Biomedical Ontologies

ICBO/ODLS

E. T. Hobbs, S. M. Goralski, A. Mitchell, A. Simpson, D. Leka, E. Kotey, M. Sekira, J. B. Munro, S. Nadendla, R. Jackso, A. Gonzalez-Agirre, M. Krallinger, M. G. Giglio, and I. Erill
Mining stroke discharge reports: a new text mining tool developed by the ICTUSnet network

International Journal of Stroke

S. Barzegar, A. Gonzalez-Agirre, A. Moreno-Rojas, C. Jiménez, E. Martínez, M. Krallinger, M. Villegas, and R. Maria Vivanco-Hidalgo
Quantum machine learning with hybrid quantum-classical computation

A. Cardenete
Building Uncertainty Models on Top of Black-Box Predictive APIs

IEEE Access

A. Brando, D. Torres, J. A. Rodriguez-Serrano, and J. Vitria
Contention-aware Application Performance Prediction for Disaggregated Memory Systems

Computing Frontiers (CF)

F. Zacarias, R. Nishtala, and P. Carpenter
Cost-Aware Prediction of Uncorrected DRAM Errors in the Field

International Conference for High Performance Computing, Networking, Storage, and Analysis (SC)

I. Boixaderas, J. Bartolome, P. Carpenter, D. Zivanovic, D. Vicente, P. Radojkovic, S. More, M. Casas, and E. Ayguadé
The proliferative history shapes the DNA methylome of B-cell tumors and predicts clinical outcome

Nature Cancer

M. Duran-Ferrer, G. Clot, F. Nadeu, R. Beekman, T. Baumann, J. Nordlund, Y. Marincevic-Zuniga, G. Lönnerholm, A. Rivas-Delgado, S. Martín, R. Ordoñez, G. Castellano, M. Kulis, A. C. Queirós, S-T. Lee, J. Wiemels, R. Royo, M. Puiggròs, J. Lu, E. Giné, S. Beà, P. Jares, X. Agirre, F. Prosper, C. López-Otín, X. S. Puente, C. C. Oakes, T. Zenz, J. Delgado, A. López-Guillermo, E. Campo, and J. Ignacio Martín-Subero
UEP: an open-source and fast classifier for predicting the impact of mutations in protein–protein complexesAbstractMotivationResultsAvailability and implementationSupplementary information

Bioinformatics

P. Amengual-Rigo, J. Fernández-Recio, and V. Guallar
SeqEditor: an application for primer design and sequence analysis with or without GTF/GFF files

Bioinformatics

A. Hafez, R. Futami, A. Arastehfar, F. Daneshnia, A. Miguel, F. J. Roig, B. Soriano, J. Perez-Sánchez, T. Boekhout, T. Gabaldón, and C. Llorens
MetaPhOrs 2.0: integrative, phylogeny-based inference of orthology and paralogy across the tree of life

Nucleic Acids Research

U. Chorostecki, M. Molina, L. P. Pryszcz, and T. Gabaldón

Pages