Publications

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Author Title Type [ Year(Asc)]
2015
M. Casas, Moreto, M., Álvarez, L., Castillo, E., Chasapis, D., Hayes, T., Jaulmes, L., Palomar, O., Ünsal, O. S., Cristal, A., Ayguadé, E., Labarta, J., and Valero, M., Runtime-Aware Architectures, Euro-Par. 2015.
L. Álvarez, Moreto, M., Casas, M., Castillo, E., Martorell, X., Labarta, J., Ayguadé, E., and Valero, M., Runtime-Guided Management of Scratchpad Memories in Multicore Architectures, 2015 International Conference on Parallel Architecture and Compilation (PACT) . pp. 379-391, 2015.
I. Agirre, Azkarate-askasua, M., Larrucea, A., Perez, J., Vardanega, T., and Cazorla, F., A safety concept for a railway mixed-criticality embedded system based on multicore partitioning, 13th IEEE International Conference on Dependable, Autonomic and Secure Computing (DASC-2015) . pp. 1780-1787, 2015.
C. Fenollosa, Otón, M., Andrio, P., Cortés, J., Orozco, M., and J Goñi, R., SEABED: Small molEcule activity scanner weB servicE baseD, Bioinformatics, vol. 31, no. 5. pp. 773-775, 2015.
C. Prodhomme and Doblas-Reyes, F. J., Seasonal prediction of seasonal extremes . First MedCOF Training Workshop on Seasonal Forecasting, Madrid, Spain, 2015.
F. J. Doblas-Reyes, Seasonal-to-decadal forecasting with EC-Earth at IC3/BSC . EC-Earth meeting, Reading, UK, 2015.
G. Fernandez, Abella, J., Quiñones, E., Fossati, L., Zulianello, M., Vardanega, T., and Cazorla, F., Seeking Time-Composable Partitions of Tasks for COTS Multicore Processors, IEEE 18th International Symposium on Real-Time Distributed Computing, (ISORC). pp. 208-217, 2015.
B. Dickov, Carpenter, P., Pericas, M., and Ayguadé, E., Self-Tuned Software-Managed Energy Reduction in InfiniBand Links, Parallel and Distributed Systems (ICPADS), 2015 IEEE 21st International Conference on . pp. 649-657, 2015.
R. Banks, Tiana-Alsina, J., Baldasano, J. M., Rocadenbosch, F., and Papayannis, A., Sensitivity of boundary layer variables to WRF model PBL schemes during the 2014 Athens HygrA-CD campaign, EGU General Assembly 2015. European Geophysical Union, Vienna, Austria, pp. 185-201, 2015.
M. Habibian, Martínez-Montero, S., Portella, G., Chua, Z., D Bohle, S., Orozco, M., and Damha, M. J., Seven-Membered Ring Nucleoside Analogues: Stereoselective Synthesis and Studies on Their Conformational Properties., Org Lett, vol. 17, no. 21. pp. 5416-5419, 2015.
F. Doblas-Reyes, Some comments from WGSIP. AGCI Workshop, Aspen, USA, 2015.
R. Tous, Gounaris, A., Tripiana, C., Torres, J., Girona, S., Ayguadé, E., Labarta, J., Becerra, Y., Carrera, D., and Valero, M., Spark Deployment and Performance Evaluation on the MareNostrum Supercomputer, Big Data (Big Data), 2015 IEEE International Conference on . IEEE, pp. 299-306, 2015.
F. J. Doblas-Reyes, SPECS: Climate Predictions for Climate Services. 17th Meeting of the Working Group on Seasonal-to-Interannual Prediction, Norrköping, Sweden, 2015.
P. A. Bretonnière and Stephens, A., SPECS data repositories: status and upload. SPECS 4th GA , Norrköping, Sweden, 2015.
S. Milutinovic, Abella, J., Hardy, D., Quiñones, E., Puaut, I., and Cazorla, F., Speeding up Static Probabilistic Timing Analysis, Architecture of Computing Systems – ARCS 2015, vol. 9017, no. Lecture Notes in Computer Science. pp. 236-247, 2015.
J. Planas, Badia, R. M., Ayguadé, E., and Labarta, J., SSMART: Smart Scheduling of Multi-architecture Tasks on Heterogeneous Systems, Proceedings of the Second Workshop on Accelerator Programming Using Directives. ACM, New York, NY, USA, pp. 1:1–1:11, 2015.
V. Torralba, Doblas-Reyes, F. J., Davis, M., and González-Reviriego, N., State-of-the-art seasonal forecasts for the wind energy sector, Poster. EUPORIAS General Assembly, Winterthur, Switzerland, 2015.
E. D. Babot, José, C., Cañellas, M., Sancho, F., Lucas, F., Guallar, V., Kalum, L., Lund, H., Gröbe, G., Scheibner, K., and , Steroid hydroxylation by basidiomycete peroxygenases: A combined experimental and computational study, Applied and environmental microbiology, vol. 81. American Society for Microbiology, pp. 4130–4142, 2015.
G. Rossetti, Dans, P. D., Gomez-Pinto, I., Ivani, I., González, C., and Orozco, M., The structural impact of DNA mismatches, Nucleic Acids Research, vol. 43, no. 8. pp. 4309-4321, 2015.
A. Arcella, Dreyer, J., Ippoliti, E., Ivani, I., Portella, G., Gabelica, V., Carloni, P., and Orozco, M., Structure and dynamics of oligonucleotides in the gas phase., Angewandte Chemie International Edition, vol. 54, no. 2. pp. 467-471, 2015.
M. Yubero-Gómez, Rubio-Campillo, X., and López-Cachero, J., The study of spatiotemporal patterns integrating temporal uncertainty in late prehistoric settlements in northeastern Spain, Archaeological and Anthropological Sciences. Springer Berlin Heidelberg, pp. 1–14, 2015.
A. Gkikas, Basart, S., Hatzianastassiou, N., Pey, J., Querol, X., Amiridis, V., Jorba, O., Gassó, S., and Baldasano, J. M., Study of the Mediterranean desert dust outbreaks' vertical structure based on a synergistic use of satellite and ground retrievals. EGU 2015, Vienna, Austria, 2015.
S. Martínez-Montero, Deleavey, G. F., Dierker-Viik, A., Lindovska, P., Ilina, T., Portella, G., Orozco, M., Parniak, M. A., González, C., and Damha, M. J., Synthesis and Properties of 2'-Deoxy-2',4'-difluoroarabinose-Modified Nucleic Acids, Journal of Organic Chemistry, vol. 80, no. 6. pp. 3083-3091, 2015.
S. Saen-oon, Cabeza de Vaca, I., Masone, D., Medina, M., and Guallar, V., A theoretical multiscale treatment of protein–protein electron transfer: The ferredoxin/ferredoxin-NADP+ reductase and flavodoxin/ferredoxin-NADP+ reductase systems, Biochimica et Biophysica Acta (BBA) - Bioenergetics, vol. 1847. pp. 1530-1538, 2015.
P. Radojkovic, Carpenter, P., Moreto, M., Cakarevic, V., Verdú, J., Pajuelo, A., Cazorla, F., Nemirovsky, M., and Valero, M., Thread Assignment in Multicore/Multithreaded Processors: A Statistical Approach, IEEE Transactions on Computers, vol. 65. pp. 256-269, 2015.
P. Fuentes, Vallejo, E., Camarero, C., Beivide, R., and Valero, M., Throughput Unfairness in Dragonfly Networks under Realistic Traffic Patterns, 2015 IEEE International Conference on Cluster Computing . pp. 801-808, 2015.
C. Hernandez and Abella, J., Timely Error Detection for Effective Recovery in Light-Lockstep Automotive Systems, IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems (IEEE TCAD), vol. 34, no. 11. pp. 1718-1729, 2015.
F. Wartel, Kosmidis, L., Gogonel, A., Baldovin, A., Stephenson, Z., Triquet, B., Quiñones, E., Lo, C., Mezzetti, E., Broster, I., Abella, J., Cucu-Grosjean, L., Vardanega, T., and Cazorla, F., Timing Analysis of an Avionics Case Study on Complex Hardware/Software Platforms, 18th Design, Automation and Test in Europe Conference (DATE). pp. 397-402, 2015.
M. A. Serrano, Melani, A., Vargas, R., Marongiu, A., Bertogna, M., and Quiñones, E., Timing Characterization of OpenMP4 Tasking Model, Compilers, Architecture and Synthesis for Embedded Systems (CASES), 2015 International Conference on . pp. 157-166, 2015.
C. Camarero, Vallejo, E., and Beivide, R., Topological Characterization of Hamming and Dragonfly Networks and Its Implications on Routing, 11th High Performance and Embedded Architecture and Compilation (HiPEAC-2015). ACM, Amsterdam, The Netherlands, 2015.
C. Camarero, Vallejo, E., and Beivide, R., Topological Characterization of Hamming and Dragonfly Networks and its Implications on Routing, ACM Transactions on Architecture and Code Optimization. 2015.
J. Ejarque, Micsik, A., and Badia, R. M., Towards Automatic Application Migration to Clouds, 2015 IEEE 8th International Conference on Cloud Computing . IEEE, pp. 25-32, 2015.
J. Espinosa, De Andres, D., Ruiz, J. Carlos, Hernandez, C., and Abella, J., Towards Certification-aware Fault Injection Methodologies Using Virtual Prototypes, 10th IEEE Forum on specification & Design Languages (FDL), Barcelona, Spain. 2015.
C. Hernandez, Abella, J., Cazorla, F., Andersson, J., and Gianarro, A., Towards Making a LEON3 Multicore Compatible with Probabilistic Timing Analysis, 20th Data Systems In Aerospace Conference (DASIA), Barcelona, Spain. 2015.
V. Alexandrov and Esquivel-Flores, O., Towards Monte Carlo preconditioning approach and hybrid Monte Carlo algorithms for Matrix Computations, Computers & Mathematics with Applications , vol. 70, no. 11. pp. 2709-2718 , 2015.
A. Tchernykh, Schwiegelsohn, U., Alexandrov, V., and Talbi, E. -ghazali, Towards Understanding Uncertainty in Cloud Computing Resource Provisioning, Procedia Computer Science, vol. V51 . pp. 1772-1781, 2015.
I. Perez, Vallejo, E., and Bosque, J. Luis, TraceRep: Gateway for Sharing and Collecting Traces in HPC Systems, Science Gateways (IWSG), 2015 7th International Workshop on . pp. 67-72, 2015.
J. Gao, Orozco, M., and Peishoff, C. E., Tribute to William L. Jorgensen., Journal of Physical Chemistry B , vol. 119, no. 3. pp. 621-623, 2015.
J. Capdevila, Cerquides, J., Nin, J., and Torres, J., Tweet-SCAN: An event discovery technique for geo-located tweets, Artificial Intelligence Research and Development. Proceedings of the 18th International Conference of the Catalan Association for Artificial Intelligence, vol. 277, no. Frontiers in Artificial Intelligence and Applications. pp. 110-119, 2015.
O. Tintó-Prims, Castrillo, M., Serradell, K., Mula-Valls, O., Cortés, A., Doblas-Reyes, F. J., and Labarta, J., Understanding Scientific Application’s Performance, 2nd International BSC Doctoral Symposium. 2015.
O. Tintó-Prims, Castrillo, M., Serradell, K., Mula-Valls, O., Cortés, A., Doblas-Reyes, F. J., and Labarta, J., Understanding Scientific Application’s Performance using BSC performance tools, International Conference on Computational Sciences. Reykjavik, 2015.
C. Prodhomme, Reyes, F. Doblas -, and Bellprat, O., Understanding the 2003 and 2010 heat waves, Poster. EC-Earth meeting, Reading, UK, 2015.
M. Kotev, Lecina, D., Tarragó, T., Giralt, E., and Guallar, V., Unveiling Prolyl Oligopeptidase Ligand Migration by Comprehensive Computational Techniques, Biophysical journal, vol. 108. Cell Press, pp. 116–125, 2015.
T. Vreven, Moal, I. H., Vangone, A., Pierce, B. G., Kastritis, P. L., Torchala, M., Chaleil, R., Jiménez-García, B., Bates, P. A., Fernandez-Recio, J., Bonvin, A. M. J. J., and Weng, Z., Updates to the Integrated Protein-Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2, Journal of Molecular Biology, vol. 427, no. 19. pp. 3031-3041, 2015.
M. Benito, Vallejo, E., and Beivide, R., On the Use of Commodity Ethernet Technology in Exascale HPC Systems, 2015 IEEE 22nd International Conference on High Performance Computing (HiPC). pp. 254-263, 2015.
D. Padula, Alemandi, M., Pessolani, P., Cortes, T., Gonnet, S., and Tinetti, F., A User-space Virtualization-aware Filesystem, 3er Congreso Nacional de Ingeniería Informática/Sistemas de Información. 2015.
D. Montero, Yannuzzi, M., Shaw, A., Jacquin, L., Pastor, A., Serral-Gracia, R., Lioy, A., Risso, F., Basile, C., Sassu, R., and , Virtualized security at the network edge: a user-centric approach, Communications Magazine, IEEE, vol. 53. IEEE, pp. 176–186, 2015.
D. Garcia-Gasulla, Bejar, J., Cortés, U., Ayguadé, E., and Labarta, J., A Visual Embedding for the Unsupervised Extraction of Abstract Semantics, http://arxiv.org/abs/1507.08818. 2015.
R. Molina, Stella, S., Redondo, P., Gomez, H., Marcaida, M. José, Orozco, M., Prieto, J., and Montoya, G., Visualizing phosphodiester-bond hydrolysis by an endonuclease, Nature Structural & Molecular Biology, vol. 22, no. 1. pp. 65-72, 2015.
M. Ménégoz, F Reyes, D. -, Guemas, V., Muhammad, A., and Massonnet, F., Volcanic forcing in decadal forecasts of surface temperature, Poster. International Union of Geodesy and Geophysics (IUGG), Prague, Czech Republic, 2015.

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