Publications

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Author Title Type [ Year(Asc)]
2012
A. Hospital, Andrio, P., Fenollosa, C., Cicin-Sain, D., Orozco, M., and Gelpí, J. L., MDWeb and MDMoby: an integrated web-based platform for molecular dynamics simulations., Bioinformatics (Oxford, England), vol. 28, no. 9. pp. 1278-9, 2012.
L. Cucu-Grosjean, Santinelli, L., Houston, M., Lo, C., Vardanega, T., Kosmidis, L., Abella, J., Mezzetti, E., Quiñones, E., and Cazorla, F., Measurement-Based Probabilistic Timing Analysis for Multi-path Programs, 24th Euromicro Conference on Real-Time Systems (ECRTS 2012). Robert Davis, Pisa, Italy, pp. 91–101, 2012.
N. Poggi, Carrera, D., Gavaldà, R., Ayguadé, E., and Torres, J., A methodology for the evaluation of high response time on E-commerce users and sales, Information Systems Frontiers. 2012.
P. Wittek and Rubio-Campillo, X., Military Reconstructive Simulation in the Cloud to Aid Battlefield Excavations, 2012 IEEE 4th International Conference on Cloud Computing Technology and Science. pp. 869-874, 2012.
O. Tchepel, Ferreira, J., Fernandes, A. P., Gama, C., Baldasano, J. M., Borrego, C., Cardoso, J., Almeida, S. M., and Pio, C., Modelling of Long-range Transport of Mineral Dust in Cape Verde, European Aerosol Conference 2012 (EAC-2012), vol. . European Aerosol Assembly (EAA), 2-7 September, 2012. Granada. Spain, 2012.
N. Sonmez, A Multicore Emulator with a Profiling Infrastructure for Transactional Memory on FPGA , 2012.
F. Forti, Cavasotto, C. N., Orozco, M., Barril, X., and Luque, J. F., A Multilevel Strategy for the Exploration of the Conformational Flexibility of Small Molecules, J. Chem. Theory Comput, 8 (5), pp 1808–1819 vol. 2012.
A. - S. J and M, V., Multiple Ion Channel Block Simulations on a computational, transmurally heterogeneous, fully coupled, electro-mechanic model of the human heart in a geometrically accurate anatomical model to assess torsadogenic risk, Bioengineering UK 2012. 2012.
O. Peredo and Ortiz, J. M., Multiple-Point Geostatistical Simulation Based on Genetic Algorithms Implemented in a Shared-Memory Supercomputer, in Geostatistics Oslo 2012, vol. 17, P. Abrahamsen, Hauge, R., and Kolbjørnsen, O. Springer Netherlands, 2012, pp. 103-114.
O. Jorba, Pérez, C., Janjic, Z., Baldasano, J. M., Dabdub, D., Badia, A., Spada, M., and Haustein, K., Multiscale air quality with the NMMB/BSC Chemical Transport Model, XXXII Jornadas Científicas Asociación Meteorológica Española “Meteorología y Calidad del Aire”, vol. . Asociación Meteorológica Española (AME), 28-30 May, 2012. Alcobendas, Madrid. Spain, pp. 1-25, 2012.
O. Jorba, Pérez, C., Haustein, K., Janjic, Z., Baldasano, J. M., Dabdub, D., Badia, A., and Spada, M., Multiscale air quality with the NMMB/BSC Chemical Transport model, 32th NATO/SPS International Technical Meeting on Air Pollution Modelling and its Application, vol. . NATO/SPS: North Atlantic Treaty Organization and Science for Peace and Security, 7-11 May, 2012. Utrecht, Netherlands, 2012.
E. García, Sala, R., Rubio-Campillo, X., and Tamba, R., Multi-Scale Exploration of the Archaeological Site of Puig Ciutat (Oristà, Catalunya), European Association of Archaeologists Conference. Helsinki, 2012.
F. Ortmann, Roche, S., Greer, J. C., Huhs, G., Oriols, X., Shulthess, T., Deutsch, T., Weinberger, P., Payne, M., Sellier, J. M., Sprekels, J., Weinbub, J., Rupp, K., Nedjalkov, M., Vasileska, D., nito, A. E., Reggiani, L., Guerra, D., Ferry, D. K., Saraniti, M., Goodnick, S. M., Kloes, A., Colombo, L., Lilja, K., Mateos, J., Gonzalez, T., Velazquez, E., Palestri, P., Schenk, A., and Macucci, M., Multi-scale modelling for devices and circuits, E-Nano Newsletter, no. Special Issue April 2012. 2012.
I. G. Martín, The Multi-State Processors, 2012.
P. Radojkovic, Girbal, S., Grasset, A., Quiñones, E., Cazorla, F., and Yehia, S., Multithreaded COTS Processors for Time-Critical Environments , Transactions on Architecture and Code Optimization (TACO). ACM, 2012.
J. Bereket Lebassi-Habtezion, González, W., Thompson, T., Baldasano, J. M., and Bornstein, R. D., NCEP Regional Models Cannot Resolve Marine-PBL Bases: Implications for Regional Air Quality Simulations, 17th Conference on Air Pollution Meteorology, American Meteorological Society 92nd Annual Meeting, vol. . American Meteorological Society, 22-26 January, 2012, New Orleans, LA, USA, 2012.
M. Spada, Jorba, O., Pérez, C., Janjic, Z., and Baldasano, J. M., A New Sea-salt Module Implemented within the NMMB/BSC Chemical Transport Model, European Aerosol Conference 2012 (EAC-2012), vol. . European Aerosol Assembly (EAA), 2-7 September, 2012. Granada. Spain, 2012.
R. Bonasia, Costa, A., Folch, A., and Macedonio, G., Numerical simulation of tephra transport and deposition of the 1982 El Chichón eruption and implications for hazard assessment, Journal of Volcanology and Geothermal Research, vol. 231-232. pp. 39-49, 2012.
R. Bonasia, Costa, A., Folch, A., and Macedonio, G., Numerical simulation of tephra transport and deposition of the 1982 El Chichón eruption and implications for hazard assessment, Journal of Volcanology and Geothermal Research, no. 231. pp. 39-49, 2012.
A. Queralt, Artale, A., Calvanese, D., and Teniente, E., OCL-Lite: A Decidable (Yet Expressive) Fragment of OCL, Description Logics. 2012.
A. Queralt, Artale, A., Calvanese, D., and Teniente, E., OCL-Lite: Finite reasoning on UML/OCL conceptual schemas, Data & Knowledge Engineering, vol. 73. pp. 1-22, 2012.
V. Elangovan, Badia, R. M., and Ayguadé, E., OmpSs-OpenCL Programming Model for Heterogeneous Systems, 25th International Workshop on Languages and Compilers for Parallel Computing (LCPC2012). Tokyo, Japan, 2012.
M. Avila, Folch, A., Houzeaux, G., Eguzkitza, B., Prieto, L., and Cabezón, D., Onshore Wind Farm Modelling, Congreso Latinoamericano de Ingeniería del Viento. 2012.
A. Gkikas, Hatznianastassiou, N., Kazadzis, S., Amiridis, V., Basart, S., Marinou, E., Taylor, M., and Baldasano, J. M., Optical Properties and Radiative Impact of Intense Dust Outflows in the Mediterranean Basin, Based on Synergistic Use of Satellite, Ground-based Measurement and Modeling, European Aerosol Conference 2012 (EAC-2012), vol. . European Aerosol Assembly (EAA), 2-7 September, 2012. Granada. Spain, 2012.
P. Radojkovic, Cakarevic, V., Moretó, M., Verdú, J., Pajuelo, A., Cazorla, F., Nemirovsky, M., and Valero, M., Optimal Task Assignment in Multithreaded Processors: A Statistical Approach, 17th International Conference on Architectural Support for Programming Languages and Operating Systems (ASPLOS-2012). London, United Kingdom, 2012.
P. Radojkovic, Cakarevic, V., Moreto, M., Verdu, J., Pajuelo, A., Cazorla, F., Nemirovsky, M., and Valero, M., Optimal Task Assignment in Multithreaded Processors: A Statistical Approach, Architectural Support for Programming Languages and Operating Systems (ASPLOS). ACM, 2012.
A. J. Ferrer, Hernández, F., Tordsson, J., Elmroth, E., Ali-Eldin, A., Zsigri, C., Sirvent, R., Guitart, J., Badia, R. M., Djemame, K., Ziegler, W., Dimitrakos, T., Nair, S. K., Kousiouris, G., Konstanteli, K., Varvarigou, T., Hudzia, B., Kipp, A., Wesner, S., Corrales, M., Forgó, N., Sharif, T., and Sheridan, C., OPTIMIS: A holistic approach to cloud service provisioning, Future Generation Computer Systems, vol. 28, no. 1. pp. 66 - 77, 2012.
X. Sáez, Akgün, T., and Sánchez, E., Optimizing EUTERPE for Petascaling, in Whitepaper of PRACE-1IP project., Partnership for Advanced Computing in Europe, 2012.
V. Beltran and Ayguadé, E., Optimizing Resource Utilization with software-based Temporal Multi-Threading (sTMT), Proc. of the annual IEEE International Conference on High Performance Computing (HiPC). IEEE Computer Society, 2012.
X. Rubio-Campillo, Torrano, A., Cela, J. M., Rondelli, B., Balbo, A., Ramírez, M., Lancelotti, C., Salpeteur, M., Reyes-García, V., and Madella, M., Pandora's box: the challenge of exploring social simulation models with supercomputers, Computer Applications in Archaeology. Southampton, 2012.
J. Strassburg and Alexandrov, V., Parallel Algorithms for solving Systems of Linear Algebraic Equations through approximate Monte Carlo Matrix Inverse, 7th International Conference on Parallel Matrix Algorithms and Applications. Birkbeck University of London, 2012.
B. Eguzkitza, Houzeaux, G., Aubry, R. J., and Vázquez, M., A Parallel coupling strategy for the Chimera and Domain Decomposition methods in Computational Mechanics, Computers & Fluids, vol. In Press. 2012.
J. Strassburg, Alexandrov, V., and Gonzàlez-Martel, C., Parallel genetic algorithms for stock market trading rules, Procedia Computer Science, vol. 9. Elsevier, pp. 1306–1313, 2012.
V. Guallar, PELE: Low Cost Protein-Ligand Dynamics and Induced Fit, Structural & Computational Chemistry, Discovery Congress Chemistry, Munich (Germany) . 2012.
V. Guallar, PELE: Low Cost Protein-Ligand Dynamics and Induced Fit, Structural & Computational Chemistry, Discovery Congress Chemistry, Munich (Germany) . 2012.
S. Reine and et al., Petascaling and Performance Analysis of DALTON on Different Platforms, in PRACE white paper, 2012.
O. Jorba, Dabdub, D., Blaszczak-Boxe, C., Pérez, C., Janjic, Z., Baldasano, J. M., Spada, M., Badia, A., and Gonçalves, M., Potential significance of photoexcited NO2 on global air quality with the NMMB/BSC chemical transport model, Journal of Geophysical Research, vol. 117, no. D13301. AMER GEOPHYSICAL UNION, UNITED STATES, pp. 1-16, 2012.
T. Hussain, Shafiq, M., Pericàs, M., Nacho, N., and Ayguadé, E., PPMC : A Programmable Pattern based Memory Controller, Applied Reconfigurable Computing (ARC). HongKong, China, pp. 1–12, 2012.
T. Hussain, Navarro, N., Ayguadé, E., and Pericàs, M., PPMC : Hardware Scheduling and Memory Management Support for Multi Accelerators, 22nd International Conference on Field Programmable Logic and Applications (FPL-2012. Oslo, Norway, 2012.
S. González, Montserrat, B., Sánchez, F., Puiggros, M., Blanco, E., Martinez, L., Ramirez, A., and Torrents, D., Prediction of regulatory regions using ReLA". 16th Annual International Conference on Research in Computational Molecular Biology, 16th Annual International Conference on Research in Computational Molecular Biology, RECOMB. 2012.
F. Cazorla, Quiñones, E., Vardanega, T., Cucu, L., Triquet, B., Bernat, G., Berger, E., Abella, J., Wartel, F., Houston, M., Santinelli, L., Kosmidis, L., Lo, C., and Maxim, D., PROARTIS: Probabilistically Analysable Real-Time Systems, Transactions on Embedded Computing Systems, no. Special Issue on Probabilistic Embedded Computing . ACM, 2012.
F. Cazorla, Quiñones, E., Vardanega, T., Cucu-Grosjean, L., Triquet, B., Berger, E. D., Abella, J., Wartel, F., Houston, M., Santinelli, L., Kosmidis, L., Lo, C., and Maxim, D., PROARTIS: Probabilistically Analysable Real-Time Systems, ACM Transactions on Embedded Computing Systems. 2012.
J. Bueno-Hedo, Planas, J., Duran, A., Badia, R. M., Martorell, X., Ayguadé, E., and Labarta, J., Productive Programming of GPU Clusters with OmpSs, 26th IEEE International Parallel and Distributed Processing Symposium (IPDPS 2012). IEEE Computer Society, pp. 557-568, 2012.
P. Bellens, Programming Model and Run-Time Optimizations for the Cell/B.E., Universitat Politècnica de Catalunya (UPC), 2012.
J. M. Baldasano, Projecte ESCAT: Objectius, Metodologia i necessitats computacionals, Generalitat de Catalunya, vol. . Generalitat de Catalunya, 23 October, 2012. Barcelona. Spain, 2012.
S. Grosdidier and Fernández-Recio, J., Protein-protein docking and hot-spot prediction for drug discovery., Current pharmaceutical design, vol. 18, no. 30. pp. 4607-18, 2012.
L. Pérez-Cano, Jiménez-García, B., and Fernández-Recio, J., A protein-RNA docking benchmark (II): extended set from experimental and homology modeling data., Proteins, vol. 80, no. 7. pp. 1872-82, 2012.
A. Costa, Folch, A., Macedonio, G., Giaccio, B., Isaia, R., and Smith, V. C., Quantifying volcanic ash dispersal and impact of the Campanian Ignimbrite super-eruption, Geophysical Research Letters, vol. 39. p. n/a–n/a, 2012.
G. G. Buffett, Pelegrí, J. L., de la Puente, J., and Carbonell, R., Real time visualization of thermohaline finestructure using Seismic Offset Groups, Methods in Oceanography. pp. 2211-1220, 2012.
J. C. Sancho, Jokanovic, A., and Labarta, J., Reducing the Impact of Soft Errors on Fabric-based Collective Communications, Proceedings of the 2011 International Conference on Parallel Processing - Volume 2. Springer-Verlag, Berlin, Heidelberg, pp. 262–271, 2012.

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