Publications

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2008
Jorba, O., Loridan, T., Jiménez-Guerrero, P., Pérez, C. & Baldasano, J.M. Development of a Linkage bewteen the Advanced Reasearch WRF model with the CHIMERE chemistry transport model. (2008).
Berral, J.L., Alonso, J., Poggi, N., Gavaldà, R., Parashar, M. & Torres, J. Distributed Learning Mechanism Against Flooding Network Attacks. (2008).
González, I., Galluzzi, M., Veidenbaum, A., Ramírez, M.A., Cristal, A. & Valero, M. A distributed processor state management architecture for large-window processors. 41st Annual IEEE/ACM International Symposium on Microarchitecture (MICRO-41) 11–22 (2008).at <http://capinfo.e.ac.upc.edu/PDFs/dir14/file003697.pdf>
González, I., Galluzzi, M., Veidenbaum, A., Ramirez, A., Cristal, A. & Valero, M. A distributed processor state management architecture for large-window processors. 41st Annual IEEE/ACM International Symposium on Microarchitecture (MICRO-41) 11–22 (2008).at <http://capinfo.e.ac.upc.edu/PDFs/dir14/file003697.pdf>
González, I., Galluzzi, M., Veidenbaum, A., Ramírez, M.A., Cristal, A. & Valero, M. A Distributed Processor State Management Architecture for Large-Window Processors. (2008).
González, J.L. & Cortes, T. Distributing Orthogonal Redundancy on Adaptive Disk Arrays. (2008).
Orozco, M. DNA from quantum chemistry to genomics. (2008).
Goñi, J.R., Fenollosa, C., Pérez, A., Torrents, D. & Orozco, M. DNAlive: A tool for the physical analysis of DNA at the genomic scale. (2008).at <http://bioinformatics.oxfordjournals.org/content/24/15/1731.full>
Goñi, J.R., Fenollosa, C., Pérez, A., Torrents, D. & Orozco, M. DNAlive: a tool for the physical analysis of DNA at the genomic scale. (2008).
Costal, D., Gómez, C., Queralt, A. & Teniente, E. Drawing Preconditions of Operation Contracts from Conceptual Schemas. CAiSE 266-280 (2008).
Servat, H., Aguilar, X., González, C., Cabrera, D. & Jiménez, D.A. Drug Design Issues on the Cell BE. (2008).
Pérez, C. Dust feedbacks on atmospheric dynamics: insights from a regional model. (2008).
Moreto, M., Cazorla, F., Ramirez, A. & Valero, M. Dynamic Cache Partitioning Based on the MLP on Cache Misses. Transactions on HiPEAC 3, 1-21 (2008).
Guitart, J., Carrera, D., Beltran, V., Torres, J. & Ayguadé, E. Dynamic CPU Provisioning for Self-Managed Secure Web Applications in SMP Hosting Platforms. Computer Networks Vol. 52 (7), 1390-1409 (2008).
Boneti, C., Gioiosa, R., Cazorla, F. & Valero, M. A Dynamic Scheduler for Balancing HPC Applications. (2008).at <http://portal.acm.org/citation.cfm?id=1413412>
Orozco, M. Dynamics aspects of protein structure and interactions. (2008).
Baldasano, J.M. Earth Science Research at the Barcelona Supercomputer Center. (2008).
Diéguez, J.J., Baldasano, J.M., Jiménez-Guerrero, P., Jorba, O., Pérez, C., López, E., Güereca, L.P., Martín, F., García-Vivanco, M., Palomino, I., Querol, X., Pandolfi, M. & Sanz, M.J. El proyecto CALIOPE: Sistema de Calidad del Aire Operativo para España. Objetivo y Estado Actual. (2008).
Wallrapp, F., Masone, D. & Guallar, V. Electron transfer in the P450cam/PDX complex. The QM/MM e-pathway. The journal of physical chemistry. A 112, 12989-94 (2008).
Baldasano, J.M., Güereca, L.P., López, E., Gassó, S. & Jiménez-Guerrero, P. Emissions of Pollutans for Spanish Harbours: Development and Application of the High Elective Resolution Modelling Emission System (HERMES). (2008).
Carrera, D., Steinder, M., Whalley, I., Torres, J. & Ayguadé, E. Enabling resource sharing between transactional and batch workloads using dynamic application placement. (2008).
Lérida, J.L., Solsona, F. & Giné, F. Enhancing Prediction on Non-dedicated Clusters. Proceedings of the 14th International Euro-Par Conference on Parallel Processing 233–242 (2008).doi:10.1007/978-3-540-85451-7_26
Rocadenbosch, F., Mattis, I., Böckmann, C., Pappalardo, G., Bösenberg, J., Alados-Arboledas, L., Amodeo, A., Ansmann, A., Apituley, A., Balis, D., Chaikovsky, A., Comerón, A. & Volk, The European Aerosol Research Lidar Network (EARLINET): an overview. (2008).
Jiménez-Guerrero, P., Pay, M.T., Jorba, O., Piot, M. & Baldasano, J.M. Evaluating the annual performance of an air quality forecasting system (Caliope) with high resolution for Europe and Spain. (2008).
Jiménez-Guerrero, P., Pay, M.T., Jorba, O., Piot, M. & Baldasano, J.M. Evaluating the annual performance of an air quality forecasting system (Caliope) with high resolution for Europe and Spain. (2008).
Gonález-Férez, P., Piernas, J. & Cortes, T. Evaluating the Effectiveness of REDCAP to Recover the Locality Missed by Today?s Linux Systems. (2008).
Ortigosa, F., Araya-Polo, M., Rubio, F., Hanzich, M., de la Cruz, R. & Cela, J.M. Evaluation of 3D RTM on HPC Platforms. SEG 2008, Las Vegas, USA (2008).
Labarta, J., Rodríguez, G. & Badia, R.M. An Evaluation of Marenostrum Performance. (2008).
Ferrer, R., González, M., Silla, F., Martorell, X. & Ayguadé, E. Evaluation of Memory Performance on the Cell BE with the SARC Programming Model. (2008).at <http://garga.iet.unipi.it/medea08/>
Duran, A., Corbalán, J. & Ayguadé, E. Evaluation of OpenMP Task scheduling strategies. (2008).at <http://cobweb.ecn.purdue.edu/ParaMount/iwomp2008/index.html>
Huoponen, K., Pérez, C., Baldasano, J.M., Müller, D., Tesche, M., Schladitz, A., Freudenthaler, V., Heese, B., Esselborn, M., Weinzieri, B., Kandler, K. & Von Hoyningen-Huene, W. Evaluation of the DREAM forecast system over North Africa during SAMUN-I Campaign. (2008).
Haustein, K., Pérez, C., Baldasano, J.M., Müller, D., Tesche, M., Schladitz, A., Freudenthaler, V., Heese, B., Esselborn, M., Weinzieri, B., Kandler, K. & Hoyningen-Huene, V.W. Evaluation of the DREAM forecast system over North Africa during SAMUN-I Campaign. (2008).
Castillo, P.A., Merelo, J.J., Moreto, M., Cazorla, F., Valero, M., Mora, A.M., Laredo, J.L. & McKee, S.A. Evolutionary system for prediction and optimization of hardware architecture performance. (2008).
Emperador, A., Carrillo, O., Rueda, M. & Orozco, M. Exploring the suitability of coarse-grained techniques fort he representation of protein dynamics. (2008).at <http://www.cell.com/biophysj/abstract/S0006-3495(08)78362-0>
Duran, A., Pérez, J.M., Ayguadé, E., Badia, R.M. & Labarta, J. Extending the OpenMP Tasking Model to Allow Dependent Tasks. (2008).
Forti, F., Barril, X., Luque, F.J. & Orozco, M. Extension of the MST continuum solvation model to the RM1 semiempirical Hamiltonian. (2008).at <http://www.ncbi.nlm.nih.gov/pubmed/17705247>
Hupfeld, F., Kolbeck, B., Stender, J., Högqvist, M., Cortes, T., Martí, J. & Malo, J. FaTLease: Scalable Fault-Tolerant Lease Negotiation with Paxos. (2008).
Mamouri, R.E., Papayannis, A., Tsaknakis, G., Amiridis, V., Georgoussis, G., Avdikos, G., Pérez, C., Stohl, A. & Baldasano, J.M. Follow Up Of Saharan Dust And Smoke Aerosol Transport Over The Mediterranean Region Revealed By Calipso And Ground Based Lidars With Modeling Support. (2008).
Folch, A., Costa, A. & Macedonio, G. G. APOLLO: An automatic procedure to forecast transport and deposition of tephra. (2008).
Orozco, M. Genome scale protein simulation. (2008).
Svozil, D., Marchán, I., Pérez, A., Cheatham, T.E., Forti, F., Luque, F.J., Orozco, M. & Sponer, J. Geometrical and Electronic Structure Variability of the Sugar-phosphate Backbone in Nucleic Acids. (2008).at <http://pubs.acs.org/doi/abs/10.1021/jp801245h>
Baldasano, J.M. & Jiménez-Guerrero, P. Global and regional interactions of air quality and climate. (2008).
Sirvent, R., Badia, R.M., Currle-Linde, N. & Resch, M. GRID superscalar and GriCoL: Integrating Different Programming Approaches. (2008).
Anciaux-Sedrakian, A., Badia, R.M., Sirvent, R., Pérez, J.M., Kielmann, T. & Merzky, A. GRID superscalar and Job Mapping on the Reliable Grid Resources. (2008).
Carrillo, O. & Orozco, M. GRID-based molecular dynamics. A Tool for genomic-scale simulations of channels in proteins. (2008).at <http://www.ncbi.nlm.nih.gov/pubmed/17803238>
Guallar, V. Heme electron transfer in peroxidases: the propionate e-pathway. The journal of physical chemistry. B 112, 13460-4 (2008).
Vázquez, M., Aris, R., Rosolen, A. & Houzeaux, G. A High Performance Computational Electrophysiology Model. 8th World Congress on Computational Mechanics ({WCCM8}) and 5th European Congress on Computational Methods in Applied Sciences and Engineering ({ECCOMAS} 2008) (2008).
Jorba, O., Marrero, C., Cuevas, E. & Baldasano, J.M. High resolution modelling results of the wind flow over Canary Islands during the meteorological situation of the extratropical storm Delta (28?30 November 2005). Advances in Science and Research 2, 81-87 (2008).
Araya-Polo, M., Rubio, F., de la Cruz, R., Hanzich, M., Cela, J.M. & Scarpazza, D.P. High-Performance Seismic Acoustic Imaging by Reverse-Time Migration on the Cell/B.E. Architecture. ISCA2008 - WCSA2008 / SCIENTIFIC PROGRAMMING SPECIAL ISSUE ON HIGH PERFORMANCE COMPUTING ON CELL B.E. PROCESSORS (2008).
Jiménez-Guerrero, P., Baldasano, J.M., Jorba, O., López, E., Gassó, S., Martín, F., García-Vivanco, M., Palomino, I., Querol, X., Pandolfi, M. & Diéguez, J.J. A high-resolution system for air quality forecasting in Europe and the Iberian Peninsula: the CALIOPE project. (2008).

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