Publications

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Author Title Type [ Year(Asc)]
2012
S. Grosdidier, Carbó, L. R., Buzón, V., Brooke, G., Nguyen, P., Baxter, J. D., Bevan, C., Webb, P., Estébanez-Perpiñá, E., and Fernández-Recio, J., Allosteric conversation in the androgen receptor ligand-binding domain surfaces., Molecular endocrinology (Baltimore, Md.), vol. 26, no. 7. pp. 1078-90, 2012.
A. Miranda and Cortes, T., Analyzing Long-Term Access Locality to Find Ways to Improve Distributed Storage Systems, 20th Euromicro International Conference on Parallel, Distributed and Network-Based Computing. Garching, Germany, 2012.
G. Reig and Guitart, J., On the Anticipation of Resource Demands to Fulfill the QoS of SaaS Web Applications, 13th ACM/IEEE International Conference on Grid Computing (Grid'12). IEEE Computer Society, Beijing, China, pp. 147-154, 2012.
R. Chaudhuri, Laughton, C. A., Carrillo, O., and Orozco, M., Application of Drug-Perturbed Essential Dynamics/Molecular Dynamics (ED/MD) to Virtual Screening and Rational Drug Design, J. Chem. Theory Comput., 8 (7), pp 2204–2214 vol. 2012.
B. Rondelli, Rubio-Campillo, X., Torrano, A., Ramírez, M., Lancelotti, C., Salpeteur, M., Reyes-García, V., and Madella, M., Applying the ODD protocol in agent-based modeling of past socio-ecological dynamics, Computer Applications in Archaeology. Southampton, 2012.
M. Shafiq, Architectural Explorations for Streaming Accelerators with Customized Memory Layouts , 2012.
M. T. Pay, Jiménez-Guerrero, P., and Baldasano, J. M., Assessing sensitivity regimes of secondary inorganic aerosol formation in Europe with the CALIOPE-EU modeling system, Atmospheric Environment, vol. 51, no. 3. PERGAMON-ELSEVIER SCIENCE LTD, ENGLAND, pp. 146-164, 2012.
M. T. Pay, Jiménez-Guerrero, P., and Baldasano, J. M., Assessing sensitivity regimes of secondary inorganic aerosol formation in Europe with the CALIOPE-EU modeling system, 32th NATO/SPS International Technical Meeting on Air Pollution Modelling and its Application, vol. . NATO/SPS: North Atlantic Treaty Organization and Science for Peace and Security, 7-11 May, 2012. Utrecht, Netherlands, 2012.
B. Dickov, Pericàs, M., Houzeaux, G., Navarro, N., and Ayguadé, E., Assessing the impact of network compression on Molecular Dynamics and Finite Element Methods, 14th International Conference on High-Performance Computing and Communications (HPCC-2012). Liverpool, UK, 2012.
M. Fernández, Gioiosa, R., Quiñones, E., Fossati, L., Zulianello, M., and Cazorla, F., Assessing the suitability of the NGMP multi-core processor in the Space domain, International Conference on Embedded Software (EMSOFT). 2012.
J. M. Baldasano, Pay, M. T., and Gassó, S., Assessment of Air Pollution Episodes over Barcelona and Madrid Greater Areas (Spain) and Results from Improvement Measures, Urban Environmental Pollution 2012, vol. . 17-20 June, 2012. Amsterdam. The Netherlands, 2012.
V. Sicardi, Ortiz, J., Rincón, A., Jorba, O., Pay, M. T., Gassó, S., and Baldasano, J. M., Assessment of Kalman filter bias-adjustment technique to improve the simulation of ground-level ozone over Spain, Science of The Total Environment, vol. 416, no. 1 February 2012. ELSEVIER SCIENCE BV , NETHERLANDS, pp. 329–342, 2012.
J. M. Baldasano, Pay, M. T., and Gassó, S., Assessment of Two Typical Pollution Episodes in 2011 over Barcelona and Madrid Greater Areas (Spain), 8th International Conference on Air Quality – Science and Application, vol. 1. University of Hertfordshire, 19-23 March, Athens (Greece), pp. 89-89, 2012.
K. Haustein, Pérez, C., Baldasano, J. M., Jorba, O., Basart, S., Miller, R. L., Janjic, Z., Black, T., Nickovic, S., Todd, M. C., Washington, R., Müller, D., Tesche, M., Weinzierl, B., Esselborn, M., and Schladitz, A., Atmospheric dust modeling from meso to global scales with the online NMMB/BSC-Dust model - Part 2: Experimental campaigns in Northern Africa, Atmospheric Chemistry and Physics, vol. 12, no. 6. COPERNICUS GESELLSCHAFT MBH, GERMANY, pp. 2933 - 2958, 2012.
E. Terradellas, Baldasano, J. M., and Cuevas, E., Atmospheric Sand and Dust Forecast Prévision du sable et la poussière atmosphèrique, Afrimet V, vol. . Servicios Meteorológicos e Hidrológicos Nacionales (SMHNs) de África Occidental, 22 october, 2012. Madrid, Spain, 2012.
F. M. Lucas and Guallar, V., An atomistic view on human hemoglobin carbon monoxide migration processes., Biophysical journal, vol. 102, no. 4. pp. 887-96, 2012.
M. Alvanos, Tiotto, E., Farreras, M., and Martorell, X., Automatic Communication Coalescing for Irregular Computations in UPC Language, Proc. of the 2012 CASCON conference. IBM Toronto Lab, Toronto, Canada, 2012.
R. Nou, Giralt, J., and Cortes, T., Automatic I/O scheduler selection through online workload analysis, The 9th IEEE International Conference on Autonomic and Trusted Computing (ATC 2012). Fukuoka (Japan), 2012.
J. González, Huck, K., Giménez, J., and Labarta, J., Automatic Refinement of Parallel Applications Structure Detection, LSPP '12: Proceedings of the 2012 Workshop on Large-Scale Parallel Processing. Shanghai, China, 2012.
A. Sánchez, Montes, J., Pérez, M. S., and Cortes, T., An Autonomic Framework for Enhancing the Quality of Data Grid Services, Future Generation Computer Systems, vol. 28, no. 7. Elsevier, p. 1005--1016, 2012.
D. Carrera, Steinder, M., Whalley, I., Torres, J., and Ayguadé, E., Autonomic Placement of Mixed Batch and Transactional Workloads, IEEE Transactions on Parallel and Distributed Systems, vol. 23. IEEE Computer Society, Los Alamitos, CA, USA, pp. 219-231, 2012.
S. Royuela, Duran, A., Chunhua, L., and Quinlan, D. J., Auto-scoping for OpenMP tasks, International Workshop on OpenMP. 2012.
BioNMR http://mmb.irbbarcelona.org/BioNMR2012. 2012.
D. Adams, Altucci, L., Antonarakis, S. E., Ballesteros, J., Beck, S., Bird, A., Bock, C., Boehm, B., Campo, E., Caricasole, A., Dahl, F., Dermitzakis, E. T., Enver, T., Esteller, M., Estivill, X., Ferguson-Smith, A., Fitzgibbon, J., Flicek, P., Giehl, C., Graf, T., Grosveld, F., Guigó, R., Gut, I., Helin, K., Jarvius, J., Küppers, R., Lehrach, H., Lengauer, T., Lernmark, A., Leslie, D., Loeffler, M., Macintyre, E., Mai, A., Martens, J. H., Minucci, S., Ouwehand, W. H., Pelicci, P. G., Pendeville, H., Porse, B., Rakyan, V., Reik, W., Schrappe, M., Schübeler, D., Seifert, M., Siebert, R., Simmons, D., Soranzo, N., Spicuglia, S., Stratton, M., Stunnenberg, H. G., Tanay, A., Torrents, D., Valencia, A., Vellenga, E., Vingron, M., Walter, J., and Willcocks, S., BLUEPRINT to decode the epigenetic signature written in blood., Nature biotechnology, vol. 30, no. 3. pp. 224-6, 2012.
M. Yubero-Gómez, Rubio-Campillo, X., Cachero, F. J. L., and i Gràcia, X. E., Bronze age pathways? Past populations mobility in prehistoric landscapes, Computer Applications in Archaeology. Southampton, 2012.
M. Shafiq, Pericàs, M., Navarro, N., and Ayguadé, E., BSArc: Blacksmith Streaming Architecture for HPC Accelerators, ACM International Conference on Computing Frontiers. Cagliary (Italy), 2012.
O. Fitó, Macías, M., Julià, F., and Guitart, J., Business-Driven IT Management for Cloud Computing Providers, 4th IEEE International Conference on Cloud Computing Technology and Science (CloudCom'12). IEEE Computer Society, Taipei, Taiwan, pp. 193-200, 2012.
J. M. Baldasano, Jorba, O., Gassó, S., Pay, M. T., and Arévalo, G., Caliope: Sistema de Pronóstico Operacional de Calidad del Aire para Europa y España, XXXII Jornadas Científicas Asociación Meteorológica Española “Meteorología y Calidad del Aire”, vol. . Asociación Meteorológica Española (AME), 28-30 May, 2012. Alcobendas, Madrid. Spain, pp. 1-6, 2012.
P. Hauke, Cucchietti, F. M., Tagliacozzo, L., Deutsch, I., and Lewenstein, M., Can one trust quantum simulators?, Reports on Progress in Physics, vol. 75. p. 082401, 2012.
E. Gracia, Farré, D., Cortés, A., Ferrer-Costa, C., Orozco, M., Mallol, J., Lluís, C., Canela, E. I., McCormick, P. J., Franco, R., Fanelli, F., and Casadó, V., The catalytic site structural gate of adenosine deaminase allosterically modulates ligand binding to adenosine receptors., FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 2012.
C. Pons, Jiménez-González, D., González-Álvarez, C., Servat, H., Cabrera-Benítez, D., Aguilar, X., and Fernández-Recio, J., Cell-Dock: high-performance protein-protein docking., Bioinformatics (Oxford, England), vol. 28, no. 18. pp. 2394-6, 2012.
C. Pons, Jiménez-González, D., ilia Gonzalez-Álvarez, C., Servat, H., Cabrera-Beni­tez, D., Aguilar, X., and Fernández-Recio, J., Cell-Dock: high-performance protein-protein docking, Bioinformatics. 2012.
F. DiMaio, Rem, P., Lofti, S., Serranti, S., Bonifazi, G., Hu, M., Burganos, V., Skouras, E., Cucchietti, F., and Vázquez, M., Cement and Clean Aggregates from CDW: The C2CA Project, nternational Conference on Solid Waste Technology and Management. Philadelphia (USA), 2012.
A. Madadkar-Sobhani, Characterization of adenosine receptor in its native environment: insights from molecular dynamics simulations of palmitoylated/glycosylated, membrane-integrated human A(2B) adenosine receptor., Journal of molecular modeling. 2012.
M. Barbany, Morata, J., Meyer, T., Lois, S., Orozco, M., and de la Cruz, X., Characterization of the impact of alternative splicing on protein dynamics: the cases of glutathione S-transferase and ectodysplasin-A isoforms., Proteins, vol. 80, no. 9. pp. 2235-49, 2012.
S. Manousopoulos, Moretó, M., Gioiosa, R., Koziris, N., and Cazorla, F., Characterizing Thread Placement in the IBM POWER7 Processor, IEEE International Symposium on Workload Characterization (IISWC-2013). IEEE, San Diego, United States, pp. 1–11, 2012.
M. Macías and Guitart, J., Cheat-proof Trust Model for Cloud Computing Markets, Lecture Notes on Computer Science (LNCS), 9th International Conference on Economics of Grids, Clouds, Systems, and Services (GECON'12), vol. 7714. Berlin, Germany, pp. 154-168, 2012.
F. M. Lucas, Cisplatin, still a long way to go, TACC-2012, Theory and Applications in Computational Chemistry. Pavia, Lombardia, Italy. 2012.
R. Sulpizio, Folch, A., Costa, A., Scaini, C., and Dellino, P., Civil aviation hazard assessment of far-range volcanic ash dispersal from a violent Strombolian eruption scenario at Somma-Vesuvius volcano, Naples, Italy, Bulletin of volcanology. 2012.
M. Macías and Guitart, J., Client Classification Policies for SLA Enforcement in Shared Cloud Datacenters, 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid'12). IEEE Computer Society, Ottawa, Canada, pp. 156-163, 2012.
X. J. Collazo-Mojica, Sadjadi, S. M., Ejarque, J., and Badia, R. M., Cloud Application Resource Mapping and Scaling Based on Monitoring of QoS Constraints, The 24th International Conference on Software Engineering and Knowledge Engineering (SEKE'12). Knowledge Systems Institute Graduate School, San Francisco, United States, pp. 88–93, 2012.
X. Rubio-Campillo and Hernández, F. X., Combined arms warfare in the Spanish Civil War, VIIth Fields of Conflict Conference. Budapest, 2012.
J. Ferreira, Guevara, M., Baldasano, J. M., Tchepel, O., Schaap, M., Miranda, A. I., and Borrego, C., A comparative analysis of atmospheric emission inventories available for Europe, 15th GEIA Conference Emissions to Address Science & Policy Needs, vol. . ACCENT-IGAC-GEIA, 11-13 June, 2012. Toulouse. France, pp. 1-1, 2012.
E. Marinou, Amiridis, V., Tsekeri, A., Basart, S., Baldasano, J. M., Kazadzis, S., and Papayannis, A., Comparison of Averaged extinction profiles from CALIPSO and BSC-DREAM8b dust model over Greece, 26th International Laser Radar Conference (ILRC 26), vol. . International Coordination group for Laser Atmospheric Studies, 25-29 June, 2012. Porto Heli. Greece, 2012.
S. Royuela, Duran, A., and Martorell, X., Compiler automatic discovery of OmpSs task dependencies, Proceedings of the workshop on Languages and Compilers for Parallel Computing. 2012.
R. E. Mamouri, Ansmann, A., Nisantzi, A., Schwarz, A., Basart, S., Kokkalis, P., Baldasano, J. M., and Hadjimitsis, D. G., Complex vertical aerosol layering of natural and anthropogenic particles over the Southeastern Mediterranean: observations with Earlinet lidar and Aeronet photometer at Lemesos, Cyprus and comparison with transport modeling results, 12th IGAC2012 conference, “Atmospheric Chemistry in the Anthropocene” , vol. . International Global Atmospheric Chemistry (IGAC), 17-21 September, 2012. Beijing (China), 2012.
A. Jokanovic, Minkenberg, C., Sancho, J. C., Beivide, R., Rodriguez, G., and Labarta, J., Contention-aware Node Allocation Policy for High-performance Capacity Systems, Proceedings of the 2012 Interconnection Network Architecture: On-Chip, Multi-Chip Workshop. ACM, New York, NY, USA, pp. 5–8, 2012.
R. Bertran, González, M., Martorell, X., Navarro, N., and Ayguadé, E., Counter-Based Power Modeling Methods: Top-Down vs. Bottom-Up, The Computer Journal. 2012.
P. Lafortune, Aris, R., Vázquez, M., and Houzeaux, G., Coupled electromechanical model of the heart, Int. J. Numer. Meth. Bio. Engn., vol. 28. pp. 72-86, 2012.
P. Lafortune, Aris, R., Vázquez, M., and Houzeaux, G., Coupled Electromechanical Model of the Heart: Parallel Finite Element formulation, International Journal for Numerical Methods in Biomedical Engineering. John Wiley & Sons, 2012.

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