Publications

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Author Title Type [ Year(Asc)]
2013
V. Smiljkovic, Stipić, S., Unsal, O., Cristal, A., and Valero, M., Transaction Coalescing - Lowering Transactional Overheads by Merging Transactions, Sixth Workshop on Programmability Issues for Heterogeneous Multicores (MULTIPROG-2013). Berlin, Germany, 2013.
J. J. Valdés, Schwarz, A., Cabeza de Vaca, I., Calvo, E., Pedra, J. H. F., Guallar, V., and Kotsyfakis, M., Tryptogalinin is a tick Kunitz serine protease inhibitor with a unique intrinsic disorder., PloS one, vol. 8, no. 5. p. e62562, 2013.
P. Pessolani, Cortes, T., Gonnet, S., and Tinetti, F., Un mecanismo de IPC de microkernel embebido en el kernel de Linux, Workshop de Investigadores en Ciencias de la Computacion. Parana Entre Rios, Argentina, 2013.
G. Portella, Battistini, F., and Orozco, M., Understanding the connection between epigenetic DNA methylation and nucleosome positioning from computer simulations., PLoS computational biology, vol. 9, no. 11. p. e1003354, 2013.
E. Durán, Djebali, S., González, S., Flores, O., Mercader, J. M., Guigó, R., Torrents, D., Soler-López, M., and Orozco, M., Unravelling the hidden DNA structural/physical code provides novel insights on promoter location., Nucleic acids research, vol. 41, no. 15. pp. 7220-30, 2013.
R. de la Cruz, Hanzich, M., Folch, A., Houzeaux, G., and Cela, J. M., Unveiling WARIS code, a parallel and multi-purpose FDM framework, Lecture Notes in Computational Science and Engineering. 2013.
F. Cazorla, Vardanega, T., Quiñones, E., and Abella, J., Upper-bounding Program Execution Time with Extreme Value Theory., 13th International Workshop on Worst-Case Execution Time Analysis. OASIcs, Paris, France, pp. 61–70, 2013.
A. Fries, The use of Java in large scientific applications in HPC environments, Universitat de Barcelona (UB), 2013.
G. Llort, Servat, H., González, J., Giménez, J., and Labarta, J., On the Usefulness of Object Tracking Techniques in Performance Analysis, Proceedings of SC13: International Conference for High Performance Computing, Networking, Storage and Analysis. ACM, New York, NY, USA, pp. 29:1–29:11, 2013.
J. Kormann, Rodriguez, J. E., Gutierrez, N., de la Puente, J., Hanzich, M., and Cela, J. M., Using Power-Model Based Preconditioners for 3D Acoustic Full Waveform Inversion, SEG Technical Program Expanded Abstracts. pp. 1105-1109, 2013.
M. S. Osores, Folch, A., Collini, E., Villarosa, G., and Durant, A., Validation of the FALL3D model for the 2008 Chaitén eruption using field, laboratory and satellite data, Andean Geology, no. 40. pp. 262-276, 2013.
M. S. Osores, Folch, A., Collini, E., Villarosa, G., and Salmuni, E., Validation of the FALL3D model for the 2008 Chaitén eruption using field, laboratory and satellite data, Andean Geology, vol. 40, no. 2. pp. 262-276, 2013.
M. S. Osores, Folch, A., Collini, E., Villarosa, G., Durant, A., Pujol, G., and Viramonte, J. G., Validation of the FALL3D model for the 2008 Chaitén eruption using field, laboratory and satellite data, Andean Geology, vol. 40. pp. 262-276, 2013.
A. Mortier, Goloub, P., Podvin, T., Tanré, D., Deroo, C., Diallo, A., Diallo, T., Cuevas, E., Basart, S., and Baldasano, J. M., Variability of aerosol properties and radiative forcing over M’Bour (Senegal) as revealed by a 6 year coincident sunphotometer and LIDAR dataset, 7th International Workshop on Sand/Duststorms and Associated Dustfall. ESA/ESRIN, vol. . Laboratory for Earth Observations and Analyses of the Italian National Agency for New Technologies, Energy, and Economic Sustainable Development (ENEA), and by the European Space Agency (ESA), 02-04 December, 2013. Frascati (Rome), Italy, 2013.
S. Marras, Moragues, M., Vázquez, M., Jorba, O., and Houzeaux, G., A Variational Multiscale Stabilized Finite Element Method for the Solution of the Euler Equations of Nonhydrostatic Stratified Flows, Journal of Computational Physics, vol. 236, no. March. ACADEMIC PRESS INC ELSEVIER SCIENCE , UNITED STATES, pp. 380–407, 2013.
T. Cortes, Vivir en un Mar de Datos. Hacia una sociedad inteligente. 2013.
E. Collini, Osores, M. S., Folch, A., Viramonte, J., Villarsoa, G., and G., S., Volcanic ash forecast during the June 2011 Cordón-Caulle eruption, Natural hazards, no. 66. pp. 389-412, 2013.
M. Orozco, “When mass spectroscopy and molecular simulations meet”. Invited Talk. CECAM Meeting. Frontiers of Computational Biomolecular Spectroscopy and Mass Spectrometry. 2013.
M. Orozco, “When physics and biology meet. The 2013 Nobel Award of Chemistry”. Sant Albert Plenary Lecture. Physical Engineering Sant Albert Plenary Lecture. 2013.
E. Terradellas, Cuevas, E., and Baldasano, J. M., WMO Sand and Dust Storm Warning Advisory and Assessment System: Regional Center for Northern Africa, Middle East and Europe, GAW 2013 Symposium, vol. . Norwegian Meteorological Institute and World Meteorological Organization, 18-20 March 2013. Geneva, Switzerland, 2013.
E. Casoni and Castro, C., Zonal modeling approach in aerodynamic simulation, 25th Workshop on Computational Fluid Dynamics. 2013.
2012
I. Nuhić, Šterk, M., and Cortes, T., AbacusFS integrated storage and computational platform, IEEE MIPRO 2012. 2012.
D. Oro, Fernandez, C., Segura, C., Martorell, X., and Hernando, J., Accelerating Boosting-based Face Detection on GPUs, Proc. of the 41st International Conference on Parallel Processing. Conference Publishing Services (CPS), USA, 2012.
B. Maric, Abella, J., and Valero, M., ADAM: An Efficient Data Management Mechanism for Hybrid High and Ultra-Low Voltage Operation Caches, ACM/IEEE Great Lakes Symposium on VLSI. ACM New York, NY, USA ©2012, Salt Lake City, United States, pp. 245–250, 2012.
O. Peredo, Vázquez, M., and Houzeaux, G., Adjoint-based nonlinear optimization of complex systems governed by PDEs using HPC techniques: implementation issues and examples, 3rd Conference on Optimization Methods and Software, Crete, Greece. 2012.
C. Toledano, Bennouna, Y., Cachorro, V. E., de Galisteo, O. J. P., Stohl, A., Stebel, K., Kristiansen, N. I., Olmo, F. J., Lyamani, H., Obregón, M. A., Estellés, V., Wagner, F., Baldasano, J. M., González-Castanedo, Y., Clarisse, L., and de Frutos, A. M., Aerosol properties of the Eyjafjallajökull ash derived from sun photometer and satellite observations over the Iberian Peninsula, Atmospheric Environment, vol. 48, no. March 2012. PERGAMON-ELSEVIER SCIENCE LTD, ENGLAND, pp. 22-32, 2012.
R. E. Mamouri, Kleanthoua, S., Basart, S., Amiridis, V., Nisantzi, A., Hatzimitsis, D., and Baldasano, J. M., Aerosol Variability over Lemesos, Cyprus. Use of Ground Based Data, Satellite Observations and Model Simulations, European Aerosol Conference 2012 (EAC-2012), vol. . European Aerosol Assembly (EAA), 2-7 September, 2012. Granada. Spain, 2012.
S. Basart, Pay, M. T., Jorba, O., Pérez, C., Jiménez-Guerrero, P., Schulz, M., and Baldasano, J. M., Aerosols in the CALIOPE air quality modelling system: evaluation and analysis of PM levels, optical depths and chemical composition over Europe, Atmospheric Chemistry and Physics, vol. 12, no. 7. COPERNICUS GESELLSCHAFT MBH, GERMANY, pp. 3363–3392, 2012.
J. M. Baldasano, Air Quality Modeling over Western Mediterranean and Transport of Mineral Dust from Sahara desert, Jet Propulsion Laboratory-NASA, vol. . NASA, 21 March, 2012. Pasadena, USA, 2012.
E. Cuevas, Boucher, O., Baldasano, J. M., Schulz, M., Terradellas, E., and Morcrette, J. J., Air Quality Services.Europe and North Africa, Internatiol. Monitoring and Forecasting Dust Storms, in The Growing uses of GMES across Europe's regions, vol. , Paris, France: NEREU and European Space Agency (ESA), 2012, pp. 114-115.
S. Grosdidier, Carbó, L. R., Buzón, V., Brooke, G., Nguyen, P., Baxter, J. D., Bevan, C., Webb, P., Estébanez-Perpiñá, E., and Fernández-Recio, J., Allosteric conversation in the androgen receptor ligand-binding domain surfaces., Molecular endocrinology (Baltimore, Md.), vol. 26, no. 7. pp. 1078-90, 2012.
A. Miranda and Cortes, T., Analyzing Long-Term Access Locality to Find Ways to Improve Distributed Storage Systems, 20th Euromicro International Conference on Parallel, Distributed and Network-Based Computing. Garching, Germany, 2012.
G. Reig and Guitart, J., On the Anticipation of Resource Demands to Fulfill the QoS of SaaS Web Applications, 13th ACM/IEEE International Conference on Grid Computing (Grid'12). IEEE Computer Society, Beijing, China, pp. 147-154, 2012.
R. Chaudhuri, Laughton, C. A., Carrillo, O., and Orozco, M., Application of Drug-Perturbed Essential Dynamics/Molecular Dynamics (ED/MD) to Virtual Screening and Rational Drug Design, J. Chem. Theory Comput., 8 (7), pp 2204–2214 vol. 2012.
B. Rondelli, Rubio-Campillo, X., Torrano, A., Ramírez, M., Lancelotti, C., Salpeteur, M., Reyes-García, V., and Madella, M., Applying the ODD protocol in agent-based modeling of past socio-ecological dynamics, Computer Applications in Archaeology. Southampton, 2012.
M. Shafiq, Architectural Explorations for Streaming Accelerators with Customized Memory Layouts , 2012.
M. T. Pay, Jiménez-Guerrero, P., and Baldasano, J. M., Assessing sensitivity regimes of secondary inorganic aerosol formation in Europe with the CALIOPE-EU modeling system, Atmospheric Environment, vol. 51, no. 3. PERGAMON-ELSEVIER SCIENCE LTD, ENGLAND, pp. 146-164, 2012.
M. T. Pay, Jiménez-Guerrero, P., and Baldasano, J. M., Assessing sensitivity regimes of secondary inorganic aerosol formation in Europe with the CALIOPE-EU modeling system, 32th NATO/SPS International Technical Meeting on Air Pollution Modelling and its Application, vol. . NATO/SPS: North Atlantic Treaty Organization and Science for Peace and Security, 7-11 May, 2012. Utrecht, Netherlands, 2012.
B. Dickov, Pericàs, M., Houzeaux, G., Navarro, N., and Ayguadé, E., Assessing the impact of network compression on Molecular Dynamics and Finite Element Methods, 14th International Conference on High-Performance Computing and Communications (HPCC-2012). Liverpool, UK, 2012.
M. Fernández, Gioiosa, R., Quiñones, E., Fossati, L., Zulianello, M., and Cazorla, F., Assessing the suitability of the NGMP multi-core processor in the Space domain, International Conference on Embedded Software (EMSOFT). 2012.
J. M. Baldasano, Pay, M. T., and Gassó, S., Assessment of Air Pollution Episodes over Barcelona and Madrid Greater Areas (Spain) and Results from Improvement Measures, Urban Environmental Pollution 2012, vol. . 17-20 June, 2012. Amsterdam. The Netherlands, 2012.
V. Sicardi, Ortiz, J., Rincón, A., Jorba, O., Pay, M. T., Gassó, S., and Baldasano, J. M., Assessment of Kalman filter bias-adjustment technique to improve the simulation of ground-level ozone over Spain, Science of The Total Environment, vol. 416, no. 1 February 2012. ELSEVIER SCIENCE BV , NETHERLANDS, pp. 329–342, 2012.
J. M. Baldasano, Pay, M. T., and Gassó, S., Assessment of Two Typical Pollution Episodes in 2011 over Barcelona and Madrid Greater Areas (Spain), 8th International Conference on Air Quality – Science and Application, vol. 1. University of Hertfordshire, 19-23 March, Athens (Greece), pp. 89-89, 2012.
K. Haustein, Pérez, C., Baldasano, J. M., Jorba, O., Basart, S., Miller, R. L., Janjic, Z., Black, T., Nickovic, S., Todd, M. C., Washington, R., Müller, D., Tesche, M., Weinzierl, B., Esselborn, M., and Schladitz, A., Atmospheric dust modeling from meso to global scales with the online NMMB/BSC-Dust model - Part 2: Experimental campaigns in Northern Africa, Atmospheric Chemistry and Physics, vol. 12, no. 6. COPERNICUS GESELLSCHAFT MBH, GERMANY, pp. 2933 - 2958, 2012.
E. Terradellas, Baldasano, J. M., and Cuevas, E., Atmospheric Sand and Dust Forecast Prévision du sable et la poussière atmosphèrique, Afrimet V, vol. . Servicios Meteorológicos e Hidrológicos Nacionales (SMHNs) de África Occidental, 22 october, 2012. Madrid, Spain, 2012.
F. M. Lucas and Guallar, V., An atomistic view on human hemoglobin carbon monoxide migration processes., Biophysical journal, vol. 102, no. 4. pp. 887-96, 2012.
M. Alvanos, Tiotto, E., Farreras, M., and Martorell, X., Automatic Communication Coalescing for Irregular Computations in UPC Language, Proc. of the 2012 CASCON conference. IBM Toronto Lab, Toronto, Canada, 2012.
R. Nou, Giralt, J., and Cortes, T., Automatic I/O scheduler selection through online workload analysis, The 9th IEEE International Conference on Autonomic and Trusted Computing (ATC 2012). Fukuoka (Japan), 2012.
J. González, Huck, K., Giménez, J., and Labarta, J., Automatic Refinement of Parallel Applications Structure Detection, LSPP '12: Proceedings of the 2012 Workshop on Large-Scale Parallel Processing. Shanghai, China, 2012.
A. Sánchez, Montes, J., Pérez, M. S., and Cortes, T., An Autonomic Framework for Enhancing the Quality of Data Grid Services, Future Generation Computer Systems, vol. 28, no. 7. Elsevier, p. 1005--1016, 2012.

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