Publications

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2011
Puente, X.S., Pinyol, M., Quesada, V., Conde, L., Ordóñez, G.R., Villamor, N., Escaramis, G., Jares, P., Beà, S., González-Díaz, M., Bassaganyas, L., Baumann, T., Juan, M., López-Guerra, M., Colomer, D., Tubío, J.M.C., López, C., Navarro, A., Tornador, C., Aymerich, M., Rozman, M., Hernández, J.M., Puente, D.A., Freije, J.M.P., Velasco, G., Gutiérrez-Fernández, A., Costa, D., Carrió, A., Guijarro, S., Enjuanes, A., Hernández, L., Yagüe, J., Nicolás, P., Romeo-Casabona, C.M., Himmelbauer, H., Castillo, E., Dohm, J.C., de Sanjosé, S., Piris, M.A., de Alava, E., San Miguel, J., Royo, R., Gelpí, J.L., Torrents, D., Orozco, M., Pisano, D.G., Valencia, A., Guigó, R., Bayés, M., Heath, S., Gut, M., Klatt, P., Marshall, J., Raine, K., Stebbings, L.A., Futreal, A.P., Stratton, M.R., Campbell, P.J., Gut, I., López-Guillermo, A., Estivill, X., Montserrat, E., López-Otín, C. & Campo, E. Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia. Nature 475, 101-5 (2011).
2008
Goñi, J.R., Fenollosa, C., Pérez, A., Torrents, D. & Orozco, M. DNAlive: a tool for the physical analysis of DNA at the genomic scale. (2008).
Casagrande, F., Ratera, M., Schenk, A.D., Chami, M., Valencia, E., López, J.M., Torrents, D., Engel, A., Palacín, M. & Fotiadis, D. Projection structure of a member of the amino acid/polyamine/organocation transporter superfamily. (2008).
Quijano, C., Tomancak, P., Lopez-Marti, J., Suyama, M., Bork, P., Milan, M., Torrents, D. & Manzanares, M. Selective maintenance of Drosophila tandemly-arranged duplicated genes. (2008).
Casals, F., Ferrer-Admetlla, A., Chillarón, J., Torrents, D., Palacín, M. & Bertranpetit, J. Is there selection for the pace of successive inactivation of the arpAT gene in primates?. (2008).
2007
Goñi, J.R., Pérez, A., Torrents, D. & Orozco, M. Determining promoter location based on DNA structure first principle calculations. (2007).
Reig, N., del Rio, C., Casagrande, F., Ratera, M., Gelpí, J.L., Torrents, D., Henderson, P.J.F., Xie, H., Baldwin, S.A., Zorzano, A., Fotiadis, D. & Palacín, M. Functional and structural characterization of the first prokaryotic member of the L-amino acid transporter (LAT) family: a model for APC transporters. The Journal of biological chemistry 282, 13270-81 (2007).
2006
Suyama, M., Harrington, E.D., Bork, P. & Torrents, D. Identification and analysis of genes and pseudogenes within duplicated regions in the human and mouse genomes. (2006).
Suyama, M., Torrents, D. & Bork, P. PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments. (2006).
2005
Fernández, E., Torrents, D., Zorzano, A., Palacín, M. & Chillarón, J. Identification and functional characterization of a novel low affinity aromatic-preferring amino acid transporter (arpAT). One of the few proteins silenced during primate evolution. (2005).
Zdobnov, E.M., Campillos, M., Harrington, E.D., Torrents, D. & Bork, P. Protein coding potential of retroviruses and other transposable elements in vertebrate genomes. (2005).
2004
Suyama, M., Torrents, D. & Bork, P. BLAST2GENE: a comprehensive conversion of BLAST output into independent genes and gene fragments. (2004).
Consortium, R.G.S.P. & Torrents, D. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. (2004).
Consortium, I.C.G.S. & Torrents, D. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. (2004).
2003
Fernández, E., Torrents, D., Chillarón, J., Del Rio, M., Zorzano, A. & Palacín, M. Basolateral LAT-2 has a major role in the transepithelial flux of L-cystine in the renal proximal tubule cell line OK. (2003).
Torrents, D., Suyama, M., Zdobnov, E.M. & Bork, P. A genome-wide survey of human pseudogenes. (2003).
Waterston, R.H., Hillier, L.W., Fulton, L.A., Fulton, R.S., Graves, T.A., Pepin, K.H., Bork, P., Suyama, M., Torrents, D., Chinwalla, A.T., Mardis, E.R., McPherson, J.D. & Wilson, R.K. The human genome: genes, pseudogenes, and variation on chromosome 7. (2003).
2002
Zdobnov, E.M., Mering, V.C., Letunic, I., Torrents, D., Suyama, M., Copley, R.R., Christophides, G.K., Thomasova, D., Holt, R., Subramanian, G.M., Mueller, H.M., Dimopoulos, G., Law, J.H., Wells, M.A., Birney, E., Charlab, R. & Halpern, A.L. Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster. (2002).
Consortium, M.G.S. & Torrents, D. Initial sequencing and comparative analysis of the mouse genome. (2002).
2001
Torras-Llort, M., Torrents, D., Soriano-Garcia, J.F., Gelpí, J.L., Estevez, R., Ferrer, R., Palacín, M. & Moreto, M. Sequential amino acid exchange across b(0,+)-like system in chicken brush border jejunum. (2001).
2000
Mykkanen, J., Torrents, D., Pineda, M., Camps, M., ME, Y., Horelli-Kuitunen, N., Huoponen, K., Heinonen, M., Oksanen, J., Simell, O., ML, S., Zorzano, A., Palacín, M. & Aula, P. Functional analysis of novel mutations in y(+)LAT-1 amino acid transporter gene causing lysinuric protein intolerance (LPI). (2000).
1999
Pineda, M., Fernández, E., Torrents, D., Estevez, R., López, C., Camps, M., Lloberas, J., Zorzano, A. & Palacín, M. Identification of a membrane protein, LAT-2, that Co-expresses with 4F2 heavy chain, an L-type amino acid transport activity with broad specificity for small and large zwitterionic amino acids. (1999).
Torrents, D., Mykkanen, J., Pineda, M., Feliubadalo, L., Estevez, R., De Cid, R., Sanjurjo, P., Zorzano, A., Nunes, V., Huoponen, K., Reinikainen, A., Simell, O., ML, S., Aula, P. & Palacín, M. Identification of SLC7A7, encoding y+LAT-1, as the lysinuric protein intolerance gene. (1999).
Feliubadalo, L., Font, M., Purroy, J., Rousaud, F., Estivill, X., Nunes, V., Reig, N., Fernández, E., Estevez, R., Pineda, M., Torrents, D., Camps, M., Lloberas, J., Zorzano, A. & Palacín, M. Non-type I cystinuria caused by mutations in SLC7A9, encoding a subunit (bo,+AT) of rBAT. (1999).
1998
Torrents, D., Estevez, R., Pineda, M., Fernández, E., Lloberas, J., Shi, Y.B., Zorzano, A. & Palacín, M. Identification and characterization of a membrane protein (y+L amino acid transporter-1) that associates with 4F2hc to encode the amino acid transport activity y+L. A candidate gene for lysinuric protein intolerance. (1998).