Publications

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Author Title Type [ Year(Asc)]
2013
M. Guevara, Martínez, F., Arévalo, G., Gassó, S., and Baldasano, J. M., An improved system for modelling Spanish emissions: HERMESv2.0, Atmospheric Environment, vol. 81. PERGAMON-ELSEVIER SCIENCE LTD, ENGLAND, pp. 209 - 221, 2013.
M. Alvanos, Farreras, M., Tiotto, E., Amaral, J. N., and Martorell, X., Improving Communication in PGAS Environments: Static and Dynamic Coalescing in UPC, 27th International Conference on Supercomputing (ICS). ACM, Eugene, OR, United States, pp. 129–138, 2013.
M. Alvanos, Gabriel, T., Farreras, M., Tiotto, E., Amaral, J. N., and Martorell, X., Improving Performance of All-to-all Communication Through Loop Scheduling in PGAS Environments, 27th International Conference on Supercomputing (ICS). ACM, Eugene, OR, United States, pp. 457–458, 2013.
P. Radojkovic, Improving the Effective use of Multithreaded Architectures: Implications on Compilation, Thread Assignment, and Timing Analysis, Universitat Politecnica de Catalunya (UPC), 2013.
V. Karakostas, Tomić, S., Unsal, O., Nemirovsky, M., and Cristal, A., Improving the Energy Efficiency of Hardware-Assisted Watchpoint Systems, 50th Annual Design Automation Conference (DAC). ACM, Austin (Texas), United States, 2013.
M. Orozco, “In Silico Biology” Ciclo de Conferencias Montpelier. 2013.
J. M. Baldasano, Arévalo, G., Pay, M. T., and Gassó, S., Influence of Horizontal Grid Resolution on Air Quality Modelling Systems in Barcelona Metropolitan Area (Spain), 15th International Conference on Harmonisation within Atmospheric Dispersion Modelling for Regulatory Purposes (HARMO), vol. . Technical University of Madrid (UPM), 6-9 May. Madrid, Spain, 2013.
E. Tejedor, Álvarez, J., and Badia, R. M., Infrastructure-Agnostic Programming and Interoperable Execution in Heterogeneous Grids, Proceedings of the 7th Iberian Grid Infrastructure Conference. pp. 1–12, 2013.
F. H. Wallrapp, Voityuk, A. A., and Guallar, V., In-silico assessment of protein-protein electron transfer. a case study: cytochrome c peroxidase--cytochrome c., PLoS computational biology, vol. 9, no. 3. p. e1002990, 2013.
S. Basart, Terradellas, E., Huneeus, N., Baldasano, J. M., Morcrette, J. J., Mulcahy, J., Pejanovic, G., da Silva, A., Lu, S., and Benincasa, F., Intercomparison and evaluation of dust prediction models, 4th International Meeting on Meteorology and Climatology of the Mediterranean (4th IMMCM), vol. . Network of Meteorology of the Mediterranean and Associació Catalan de Meteorologia, February 27 - March 1, 2013. Banyuls (Roussillon), France, 2013.
R. Banks, Baldasano, J. M., Comerón, A., Sicard, M., and Rocadenbosch, F., Inter-comparison of lidar methods for obtaining planetary boundary-layer height from a July 2012 monitoring campaign over the Iberian Peninsula in the framework of EARLINET, AGU Fall Meeting. American Geophysical Union, San Francisco, USA, 2013.
W. A. Sessions, Benedetti, A., Lynch, P., Reid, J. J. S., Baldasano, J. M., Basart, S., Colarco, P. R., da Silva, A., Jorba, O., Lu, S., Morcrette, J. J., Razinger, M., Spada, M., Sekiyama, T. T., and Tanaka, T. Y., International Cooperative for Aerosol Prediction Multi-Model Ensemble (ICAP-MME), 7th International Workshop on Sand/Duststorms and Associated Dustfall. ESA/ESRIN, vol. . Laboratory for Earth Observations and Analyses of the Italian National Agency for New Technologies, Energy, and Economic Sustainable Development (ENEA), and by the European Space Agency (ESA), 02-04 December, 2013. Frascati (Rome), Italy, 2013.
O. Peredo, Puzyrev, V., Koldan, J., Houzeaux, G., Vázquez, M., de la Puente, J., and Cela, J. M., Inverse Modelling of 3D Controlled-Source Electromagnetics Using a Parallel Discrete Adjoint Method, 5th International Symposium on Three-Dimensional Electromagnetics – 3DEM-5 , Sapporo, Japan. 2013.
Y. Zheng, Zhu, M., Mira, D., and Jiang, X., Large-eddy simulation of mixing and combustion in a premixed swirling combustor with synthesis gases, Computers & Fluids, vol. 88. pp. 702 - 714, 2013.
D. Mira and Jiang, X., Large-eddy simulations of unsteady hydrogen annular flames, Computers & Fluids, vol. 80. pp. 429 - 440, 2013.
X. Rubio-Campillo and Cela, J. M., Large-scale Agent-based Simulation in Archaeology: an Approach using High-Performance Computing, BAR International Series 2494. Proceedings of the 38th Annual Conference on Computer Applications and Quantitative Methods in Archaeology, Granada, Spain, April 2010. pp. 153-159, 2013.
A. Cristal, Unsal, O., Yalcin, G., Fetzer, C., Wamhoff, J. - T., Felber, P., Harmanci, D., and Sobe, A., Leveraging Transactional Memory for Energy-efficient Computing below Safe Operation Margins, 8th ACM SIGPLAN Workshop on Transactional Computing (TRANSACT 2013). Texas, United States, 2013.
F. Raimondi, Felline, A., Portella, G., Orozco, M., and Fanelli, F., Light on the structural communication in Ras GTPases., Journal of biomolecular structure & dynamics, vol. 31, no. 2. pp. 142-57, 2013.
F. Raimondi, Felline, A., Portella, G., Orozco, M., and Fanelli, F., Light on the structural communication in Ras GTPases., Journal of biomolecular structure & dynamics, vol. 31, no. 2. pp. 142-57, 2013.
J. Martí, Queralt, A., Gasull, D., and Cortes, T., Living Objects: Towards Flexible Big Data Sharing, Journal of Computer Science & Technology, vol. 13. pp. 56-63, 2013.
R. Bonasia, Scaini, C., Capra, L., Nathenson, M., Araña Salinas, L., Siebe, C., and Folch, A., “Long-range hazard assessment of volcanic ash dispersal for a Plinian eruptive scenario at Popocatépetl volcano (Mexico): implications for civil aviation safety, Bulletin of Volcanology, vol. 76. p. 789, 2013.
R. Bonasia, Scaini, C., Capra, L., Nathenson, M., Araña Salinas, L., Siebe, C., and Folch, A., Long-range hazard assessment of volcanic ash dispersal for a Plinian eruptive scenario at Popocatépetl volcano (Mexico): implications on civil aviation, Bulletin of Volcanology, no. 76. p. 789, 2013.
R. Gayatri, Badia, R. M., and Ayguadé, E., Loop Level Speculation in a Task Based Programming Model, IEEE Conference on High Performance Computing (HiPC 2013). IEEE press, Bengaluru, India, pp. 1–10, 2013.
N. Rajovic, Vilanova, L., Villavieja, C., Puzovic, N., and Ramirez, A., The Low Power Architecture Approach Towards Exascale Computing, Journal of Computational Science, vol. 4. pp. 439–443, 2013.
N. Rajovic, Puzovic, N., Vilanova, L., Villavieja, C., and Ramirez, A., The low-power architecture approach towards exascale computing, Journal of Computational Science. 2013.
J. M. Baldasano and Guevara, M., Main Challenges for the Compilation of Urban Emission Inventories in Spain,What We Expect of FAIRMODE, 6th FAIRMODE Plenary Meeting, vol. . Forum for Air Quality Modelling in Europe (FAIRMODE), 10-12 April, 2013. Antwerp, Belgium, 2013.
V. Guallar, Mapping Complex Electron transfer in Proteins by Computational Tools, 34 Reunión Bienal de la RSEQ, Santander, Spain . 2013.
V. Guallar, Mapping Complex Electron transfer in Proteins by Computational Tools. Real Sociedad Española de Quimica, Santander, 2013.
F. Wartel, Kosmidis, L., Lo, C., Triquet, B., Quiñones, E., Abella, J., Gogonel, A., Baldovin, A., Mezzetti, E., Cucu-Grosjean, L., Vardanega, T., and Cazorla, F., Measurement-Based Probabilistic Timing Analysis: Lessons from an Integrated-Modular Avionics Case Study, 8th IEEE International Symposium on Industrial Embedded Systems (SIES). IEEE, Porto, Portugal, 2013.
L. Kosmidis, Vardanega, T., Quiñones, E., Abella, J., and Cazorla, F., Measurement-Based Probabilistic Timing Analysis to Buffer Resources, 13th International Workshop on Worst-Case Execution Time Analysis. OASIcs, Paris, France, pp. 2–10, 2013.
J. M. Baldasano, Mineral dust forecast models, Summer of School 2013. ITaRS (Initial Training for atmospheric Remote Sensing), vol. . ITARS, 23 September-4 October, 2013. Bucharest (Rumania), 2013.
J. M. Baldasano and Basart, S., Mineral dust modelling from meso to global scales, Workshop CV Dust Atmospheric Aerosols in Cape Verde Region, vol. . Universidade d’Aveiro, 11 January, 2012. Aveiro, Portugal, 2013.
J. M. Baldasano, Mineral dust modelling from meso to global scales, RICTA2013 1st Iberian Meeting on Aerosol Science and Technology, vol. . Universidade de Evora and Évora Geophysics Centre, 1-3 July, 2013. Evora, Portugal, 2013.
O. Tchepel, Gama, C., Ferreira, J., Cardoso, J., Basart, S., Baldasano, J. M., Borrego, C., and Pio, C., Mineral dust modelling in Cape Verde, Workshop CV Dust Atmospheric Aerosols in Cape Verde Region, vol. . Universidade d’Aveiro, 11 January, 2012. Aveiro, Portugal, 2013.
A. Badia, Jorba, O., Nuterman, R., Baklanov, A., and Baldasano, J. M., Model inter-comparison study between NMMB/BSC-CTM and Enviro-HIRLAM on-line systems contributing to the AQMEII-Phase2 initiative, 33rd International Technical Meeting on Air Pollution Modelling and its Application, vol. . NATO/SPS, 26-30 August, 2013, Miami, Florida USA, 2013.
C. Gama, Tchepel, O., Ferreira, J., Baldasano, J. M., and Pio, C., Modelação das poeiras atmosféricas provenientes do deserto: aplicação à região de Cabo Verde, 10º CNA-12ª CNEA: 10ª Conferência Nacional do Ambiente- 12ª Congresso Nacional de Engenharia do Ambiente, vol. . Departamento de Ambiente e Ordenamento da Universidade de Aveiro and Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, 6-8 November, 2013. Aveiro, Portugal, 2013.
M. Spada, Jorba, O., Pérez, C., Janjic, Z., and Baldasano, J. M., Modeling and evaluation of the global sea-salt aerosol distribution: sensitivity to emission schemes and resolution effects at coastal/orographic sites, Atmospheric Chemistry and Physics Discussions, vol. 13. Copernicus Publications, Germany, pp. 11597–11657, 2013.
J. M. Baldasano, Modelización numérica de la tormenta tropical "DELTA" sobre las Islas Canarias. Importancia de la alta resolución, XIX Congreso de la Division de Dinamica De Fluidos, vol. . Sociedad Mexicana de Física, 13-15 November, 2013. Jiutepec, Morelos (México), 2013.
A. Bates, Calmet, H., Cetto, R., Doorly, D., Houzeaux, G., de la Cruz, R., Vázquez, M., and Gambaruto, A., Modelling a Sniff in Extensive Human Airways: Aspects of Physiology and Fluid Mechanics, Congress on Numerical Method in Engineering CMN13. Bilbao (Spain), 2013.
M. Orozco, “The moleclar basis of the transport cycle of APC anti-porters”. Invited Talk. PRACE Scientific Conference.. 2013.
A. Hosseini, Espona-Fiedler, M., Soto-Cerrato, V., Quesada, R., Pérez-Tomás, R., and Guallar, V., Molecular Interactions of Prodiginines with the BH3 Domain of Anti-Apoptotic Bcl-2 Family Members., PloS one, vol. 8, no. 2. p. e57562, 2013.
J. Strassburg and Alexandrov, V., A Monte Carlo Approach to Sparse Approximate Inverse Matrix Computations, International Conference for Computational Science, ICCS 2013, vol. 18. Elsevier, Procedia Computer Science, pp. 2307-2316, 2013.
R. Takahashi, Monte Carlo Free Ligand Diffusion and Absolute Binding Free Energy Calculations, Molecular Kinetic 2013. Berlin, Germany. 2013.
M. Orozco, “Multilevel simulation of DNA”. Invited lecture. American Chemical Society Meeting. 2013.
L. Kosmidis, Abella, J., Quiñones, E., and Cazorla, F., Multi-Level Unified Caches for Probabilistically Time Analysable Real-Time Systems, IEEE Real-Time Systems Symposium (RTSS) 2013. Vancouver, Canada, 2013.
O. Jorba, Badia, A., Spada, M., Pérez, C., Basart, S., Baldasano, J. M., Janjic, Z., and Dabdub, D., Multiscale Air Quality Modelling with the NMMB/BSC Chemical Transport model, XIX Jornades Eduard Fontseré (JEF) 2013, vol. . Associació Catalana de Meteorologia (ACAM), 22-24 November, 2013. Barcelona. Spain, 2013.
M. Nemirovsky and Tullsen, D., Multithreading Architectures, SYNTHESIS LECTURES ON COMPUTER ARCHITECTURE, Mark Hill. 2013.
A. Hospital, Faustino, I., Collepardo-Guevara, R., González, C., Gelpí, J. L., and Orozco, M., NAFlex: a web server for the study of nucleic acid flexibility., Nucleic acids research, vol. 41, no. Web Server issue. pp. W47-55, 2013.
A. Hospital, Faustino, I., Collepardo-Guevara, R., González, C., Gelpí, J. L., and Orozco, M., NAFlex: a web server for the study of nucleic acid flexibility., Nucleic Acids Res, vol. 41, no. Web Server issue. pp. W47-55, 2013.
M. D'Abramo, Castellazzi, C. L., Orozco, M., and Amadei, A., On the nature of DNA hyperchromic effect., The journal of physical chemistry. B, vol. 117, no. 29. pp. 8697-704, 2013.

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