Publications

Export 23 results:
Author Title [ Type(Desc)] Year
Filters: Keyword is Humans  [Clear All Filters]
Journal
Grosdidier, S. et al. Allosteric conversation in the androgen receptor ligand-binding domain surfaces. Molecular endocrinology (Baltimore, Md.) 26, 1078-90 (2012).
Gracia, E. et al. The catalytic site structural gate of adenosine deaminase allosterically modulates ligand binding to adenosine receptors. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 27, 1048-61 (2013).
Islam, B. et al. Conformational dynamics of the human propeller telomeric DNA quadruplex on a microsecond time scale. Nucleic acids research 41, 2723-35 (2013).
Pérez-Cano, L. et al. Conformational transitions in human translin enable nucleic acid binding. Nucleic acids research 41, 9956-66 (2013).
Orozco, M. The dynamic view of proteins: comment on "Comparing proteins to their internal dynamics: exploring structure-function relationships beyond static structural alignments". Physics of life reviews 10, 29-30; discussion 39-40 (2013).
Kulis, M. et al. Epigenomic analysis detects widespread gene-body DNA hypomethylation in chronic lymphocytic leukemia. Nature genetics 44, 1236-42 (2012).
Taboureau, O., Baell, J. B., Fernández-Recio, J. & Villoutreix, B. O. Established and emerging trends in computational drug discovery in the structural genomics era. Chemistry & biology 19, 29-41 (2012).
Djebali, S. et al. Evidence for transcript networks composed of chimeric RNAs in human cells. PloS one 7, e28213 (2012).
Terrazas, M., Alagia, A., Faustino, I., Orozco, M. & Eritja, R. Functionalization of the 3'-ends of DNA and RNA strands with N-ethyl-N-coupled nucleosides: a promising approach to avoid 3'-exonuclease-catalyzed hydrolysis of therapeutic oligonucleotides. Chembiochem : a European journal of chemical biology 14, 510-20 (2013).
Small, Y. A., Guallar, V., Soudackov, A. V. & Hammes-Schiffer, S. Hydrogen bonding pathways in human dihydroorotate dehydrogenase. The journal of physical chemistry. B 110, 19704-10 (2006).
Raimondi, F., Felline, A., Portella, G., Orozco, M. & Fanelli, F. Light on the structural communication in Ras GTPases. Journal of biomolecular structure & dynamics 31, 142-57 (2013).
Hospital, A. et al. MDWeb and MDMoby: an integrated web-based platform for molecular dynamics simulations. Bioinformatics (Oxford, England) 28, 1278-9 (2012).
Hospital, A. et al. NAFlex: a web server for the study of nucleic acid flexibility. Nucleic acids research 41, W47-55 (2013).
Pons, C., Glaser, F. & Fernández-Recio, J. Prediction of protein-binding areas by small-world residue networks and application to docking. BMC bioinformatics 12, 378 (2011).
Rao, S., Bálint, S., Cossins, B. P., Guallar, V. & Petrov, D. Raman study of mechanically induced oxygenation state transition of red blood cells using optical tweezers. Biophysical journal 96, 209-16 (2009).
Chen, Y. et al. Structural basis for Rab1 de-AMPylation by the Legionella pneumophila effector SidD. PLoS pathogens 9, e1003382 (2013).
Castaño, T. et al. Synthesis, structural analysis, and biological evaluation of thioxoquinazoline derivatives as phosphodiesterase 7 inhibitors. ChemMedChem 4, 866-76 (2009).
Fernández-Recio, J. & Verma, C. Theory and simulation: complexity and emergence. Current opinion in structural biology 22, 127-9 (2012).
Perez, D. I. et al. Thienylhalomethylketones: Irreversible glycogen synthase kinase 3 inhibitors as useful pharmacological tools. Bioorganic & medicinal chemistry 17, 6914-25 (2009).
Fernández-Real, J. M. et al. Transferrin receptor-1 gene polymorphisms are associated with type 2 diabetes. European journal of clinical investigation 40, 600-7 (2010).
Durán, E. et al. Unravelling the hidden DNA structural/physical code provides novel insights on promoter location. Nucleic acids research 41, 7220-30 (2013).
Puente, X. S. et al. Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia. Nature 475, 101-5 (2011).
Ballana, E. et al. ZNRD1 (zinc ribbon domain-containing 1) is a host cellular factor that influences HIV-1 replication and disease progression. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 50, 1022-32 (2010).