Publications

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Author Title Type [ Year(Asc)]
2014
Ferrer, M., de la Puente, J. & Castillo, J. E. 3D Viscoelastic Anisotropic Seismic Modelling with High-Order Mimetic Finite Differences. International Conference on Spectral and High Order Methods (ICOSAHOM). June 23nd-27th, Salt Lake City, USA (2014). at <http://www.icosahom2014.org/images/submissions/abstracts/icosahom2014_submission_227.pdf>
Casas, M. & Bronevetsky, G. Active Measurement of Memory Resource Consumption. 28th IEEE International Parallel & Distributed Processing Symposium (IPDPS) (2014).
Casas, M. & Bronevetsky, G. Active Measurement of the Impact of Network Switch Utilization on Application Performance. 28th IEEE International Parallel & Distributed Processing Symposium (IPDPS) (2014).
Garcia, V. et al. Adaptive Runtime-Assisted Block Prefetching on Chip-Multiprocessors. OMHI Workshop 2014 (2014).
de la Puente, J. Advanced Algorithms for the Modelling and Inversion of 3D Seismic and Electromagnetic Waves: An HPC Approach. M2OPIII 2014 – Third International Workshop on Multiphysics, Multiscale and Optimization Problems. May 22nd-23rd. Bilbao, Spain (2014).
Guirado, C. et al. Aerosol characterization at the Saharan AERONET site Tamanrasset. Atmospheric Chemistry and Physics 14, 11753–11773 (2014).
Balbo, A. L. et al. Agent-Based Simulation of Holocene Monsoon Precipitation Patterns and Hunter-Gatherer Population Dynamics in Semi-arid Environments. Journal of Archaeological Method and Theory (2014). doi:10.1007/s10816-014-9203-1
Jalle, J. et al. AHRB: A High-Performance Time-Composable AMBA AHB Bus. 20th IEEE Real-Time and Embedded Technology and Applications Symposium (2014).
Pay, M. T., Martínez, F., Guevara, M. & Baldasano, J. M. Air quality forecasts at kilometer scale grid over Spanish complex terrains. Geoscientific Model Development Discussions 7, 2293–2334 (2014).
Pay, M. T., Martínez, F., Guevara, M. & Baldasano, J. M. Air quality forecasts on a kilometer-scale grid over complex Spanish terrains. Geoscientific Model Development 7, 1979–1999 (2014).
Koldan, J., Puzyrev, V., de la Puente, J., Houzeaux, G. & Cela, J. M. Algebraic multigrid preconditioning within parallel finite-element solvers for 3-D electromagnetic modelling problems in geophysics. Geophysical Journal International 197, 1442-1458 (2014).
Casoni, E. et al. Alya: computational solid mechanics for supercomputers. (2014).
Dickov, B., Pericas, M., Carpenter, P., Navarro, N. & Ayguadé, E. Analyzing performance improvements and energy savings in Infiniband Architecture using network compression. SBAC-PAD 2014 (2014).
Maric, B., Abella, J. & Valero, M. Analyzing the Efficiency of L1 Caches for Reliable Hybrid-Voltage Operation Using EDC Codes. Very Large Scale Integration (VLSI) Systems, IEEE Transactions on 22, 2211 - 2215 (2014).
Utrera, G., Gil, M. & Martorell, X. Analyzing the impact of programming models for efficient communication overlap in high-speed networks. International Conference on High Performance Computing & Simulation, HPCS 2014, Bologna, Italy, 21-25 July, 2014 218–225 (2014). doi:10.1109/HPCSim.2014.6903689
Lucas, M. F., de Vaca, I. Cabeza, Takahashi, R., Rubio-Martinez, J. & Guallar, V. Atomic Level Rendering of DNA-Drug Encounter. Biophysical Journal 106, 421 - 429 (2014).
Lucas, M. F., Cabeza de Vaca, I., Takahashi, R., Rubio-Martínez, J. & Guallar, V. Atomic Level Rendering of DNA-Drug Encounter. Biophysical journal 106, 421-9 (2014).
Hosseini, A. et al. Atomic Picture of Ligand Migration in Toluene 4-Monooxygenase. The Journal of Physical Chemistry B null (2014). doi:10.1021/jp502509a
Repchevsky, D. & Gelpi, J. Ll. BioSWR--semantic web services registry for bioinformatics. PLoS One 9, e107889 (2014).
Lensink, M. F. et al. Blind prediction of interfacial water positions in CAPRI. Proteins 82, 620-32 (2014).
Hanzich, M., Rodriguez, J. E., Gutierrez, N. & Cela, J. M. BSIT: A FLEXIBLE PLATFORM FOR DEVELOPMENT OF EFFICIENT SIMULATION SOFTWARE. IACM - ECCOMAS (2014).
Jalle, J., Kosmidis, L., Abella, J., Quiñones, E. & Cazorla, F. J. Bus Designs for Time-probabilistic Multicore Processors. Proceedings of the Conference on Design, Automation & Test in Europe 50:1–50:6 (2014). at <http://dl.acm.org/citation.cfm?id=2616606.2616668>
Fitó, O. & Guitart, J. Business-driven Management of Infrastructure-level Risks in Cloud Providers. Future Generation Computer Systems Vol. 32, 41-53 (2014).
Abella, J., Hardy, D., Puaut, I., Quiñones, E. & Cazorla, F. J. On the Comparison of Deterministic and Probabilistic WCET Estimation Techniques. Real-Time Systems (ECRTS), 2014 26th Euromicro Conference on 266-275 (2014). doi:10.1109/ECRTS.2014.16
Moncunill, V. et al. Comprehensive characterization of complex structural variations in cancer by directly comparing genome sequence reads. Nat Biotechnol 32, 1106-12 (2014).
Kosmidis, L. et al. Containing Timing-Related Certification Cost in Automotive Systems Deploying Complex Hardware. Proceedings of the The 51st Annual Design Automation Conference on Design Automation Conference 22:1–22:6 (2014). doi:10.1145/2593069.2593112
Fernandez, G. et al. Contention in Multicore Hardware Shared Resources: Understanding of the State of the Art. 14th International Workshop on Worst-Case Execution Time Analysis 39, 31–42 (2014).
Miranda, A. & Cortes, T. CRAID: Online RAID Upgrades using Dynamic Hot Data Reorganization. 12th USENIX Conference on File and Storage Technologies (2014).
Puzyrev, V. et al. CSEM monitoring of a CO2 reservoir imaged by MT. 76th EAGE Conference & Exhibition - Workshops (2014). doi:10.3997/2214-4609.20140570
Sandes, E. F. de O., Miranda, G., de Melo, A. Cristina M., Martorell, X. & Ayguadé, E. CUDAlign 3.0: Parallel Biological Sequence Comparison in Large {GPU} Clusters. 2014 14th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing, Chicago, IL, USA, May 26-29, 2014 160–169 (2014). doi:10.1109/CCGrid.2014.18
Hanzich, M., Kormann, J., Rodriguez, J. E., de la Puente, J. & Cela, J. M. Developing Full Waveform Inversion Using HPC Frameworks: BSIT. EAGE Workshop on High Performance Computing for Upstream, 7th-10th September, Crete, Greece HPC29 (2014). at <http://eage.org/event/index.php?eventid=1129&evp=13077&ActiveMenu=&Opendivs=&act=det&prev=&ses=2777>
Jones, E. M. et al. Differential Control of Heme Reactivity in Alpha and Beta Subunits of Hemoglobin: A Combined Raman Spectroscopic and Computational Study. Journal of the American Chemical Society null (2014). doi:10.1021/ja503328a
Faustino, I., Curutchet, C., Luque, J. F. & Orozco, M. The DNA-forming properties of 6-selenoguanine. Physical chemistry chemical physics : PCCP 16, 1101-10 (2014).
Liu, Q., Moreto, M., Abella, J., Cazorla, F. J. & Valero, M. DReAM: Per-Task DRAM Energy Metering in Multicore Systems. Euro-Par 2014 Parallel Processing - 20th International Conference, Porto, Portugal, August 25-29, 2014. Proceedings 111–123 (2014). doi:10.1007/978-3-319-09873-9_10
Jalle, J. et al. A Dual-Criticality Memory Controller (DCmc): Proposal and Evaluation for a Space Case Study. 35th IEEE Real-Time Systems Symposium (2014).
Mona, L. et al. EARLINET dust observations vs. BSC-DREAM8b modeled profiles: 12-year-long systematic comparison at Potenza, Italy. Atmospheric Chemistry and Physics 14, 8781–8793 (2014).
Ramirez-Velarde, R., Perez-Cazares, R., Alexandrov, N. & Garcia-Rueda, J. Jesus. Education 2.0: Student Generated Learning Materials through Collaborative Work. Procedia Computer Science Volume 29, 1835-1845 (2014).
Ramírez-Bajo, M. José et al. Effects of cadmium and mercury on the upper part of skeletal muscle glycolysis in mice. PLoS One 9, e80018 (2014).
Pandolfi, M. et al. Effects of sources and meteorology on particulate matter in the Western Mediterranean Basin: An overview of the DAURE campaign. Journal of Geophysical Research: Atmospheres 119, 4978–5010 (2014).
Djemame, K. et al. Energy Efficiency Embedded Service Lifecycle: Towards an Energy Efficient Cloud Computing Architecture. Joint Workshop Proceedings of the 2nd International Conference on ICT for Sustainability 2014 1203, 1–6 (2014).
Durand, Y. et al. EUROSERVER: Energy Efficient Node for European Micro-servers. DSD 2014 (2014).
Lezzi, D., Lordan, F., Rafanell, R. & Badia, R. M. Execution of scientific workflows on federated multi-cloud infrastructures. Euro-Par 2013: Parallel Processing Workshops 8374, 136-145 (2014).
Brömmel, D. et al. Experience with the MPI/STARSS programming model on a large production code. Advances in Parallel Computing 25, 357-366 (2014).
Rubio, F., Hanzich, M., Farrès, A., de la Puente, J. & Cela, J. M. Finite-Difference Staggered Grids in GPUs for Anisotropic Elastic Wave Propagation Simulation. Computers and Geosciences 70, 181-189 (2014).
Queralt, A., Cortes, T., Baars, H., Brinkmann, A. & Martí, J. Fusing Storage and Computing for the Domain of Business Intelligence and Analytics – Research Opportunities. 48th Annual Hawaii International Conference on System Sciences (2014).
González-Férez, P., Piernas, J. & Cortes, T. A General Framework for Dynamic and Automatic I/O Scheduling in Hard and Solid-State Drives. Journal of Parallel and Distributed Computing 2014, 2380–2391 (2014).
Julià, A. et al. A genome-wide association study identifies a novel locus at 6q22.1 associated with ulcerative colitis. Hum Mol Genet 23, 6927-34 (2014).
Abella, J., Quiñones, E., Wartel, F., Vardanega, T. & Cazorla, F. J. Heart of Gold: Making the Improbable Happen to Increase Confidence in MBPTA. Real-Time Systems (ECRTS), 2014 26th Euromicro Conference on 255-265 (2014). doi:10.1109/ECRTS.2014.33
de la Puente, J., Hanzich, M., Gutierrez, N., Rodriguez, J. E. & Kormann, J. HPC Solutions for Geophysical Exploration Problems: Efficiency, Reliability and Maintenance for Real-Life Applications. Platform of Advanced Scientific Computing (PASC 2014) 1st Conference, Zürich, Switzerland (2014).

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